Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq5234 477 3e-131 >seq5234 Length=178527 Score = 477 bits (528), Expect = 3e-131 Identities = 547/731 (75%), Gaps = 12/731 (2%) Strand=Plus/Minus Query 990 TACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATTACCTCGGAGAAGCAGTGGATC 1049 ||||||||||||||| ||| | ||||| |||||||| ||||||||| |||||||| Sbjct 141062 TACATGGAGCTGGTCAAATGGTTGGTGGAGAAGGGGATCACCTCGGAGCGAGAGTGGATC 141003 Query 1050 CAGGAGGACCAGGCCTCATACATCTCCTTCAATGCGGCCTCCAACTCGCGGTCCCAAATC 1109 | |||||||| | || ||| |||||||||| || | || ||||| || || Sbjct 141002 CGCGAGGACCAAGAGTCCTACCTCTCCTTCAACTCGACGGGCACGGCGCGGGGGCAGATT 140943 Query 1110 AAGGCTGCCTTGGACAATGCGGGAAAGATTATGAGCCTGACTAAAACCGCCCCCGACTAC 1169 ||||||||| ||||||| || || || ||| ||||| ||| |||||||| Sbjct 140942 AAGGCTGCCCTGGACAACGCAGGCCGCATCATGGTGACAACTAAGTTGGCCGCCGACTAC 140883 Query 1170 CTGGTGGGCCA---GCAGCCCGTGGAGGACATTTCCAGCAATCGGATTTATAAAATTTTG 1226 || | |||| | ||||| | ||||| || | || || | || || || Sbjct 140882 CTAATCGGCCGCGTGGTGCCCG---ATGACATCACCGGAAACCGTGTCTACCGGATCTTC 140826 Query 1227 GAACTAAACGGGTACGATCCCCAATATGCGGCTTCCGTCTTTCTGG---GATGGGCCACG 1283 || || || || ||| ||||| | || || | ||||| |||| | ||| | | Sbjct 140825 GACCTGAATGGCTACTATCCCAAGTACGCCGGAA--GTCTT-CTGGTCGGCTGGTGCCGG 140769 Query 1284 AAAAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACC 1343 || ||| |||||| |||||||||||||||||||||| || || |||||||| |||||| Sbjct 140768 AAGGAGTATGGCAAGCGGAACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACC 140709 Query 1344 AACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGGACCAAT 1403 ||||||||||||||||| || || | || || |||||| | ||||| ||||||||||| Sbjct 140708 AACATCGCGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAAC 140649 Query 1404 GAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGAAG 1463 ||||||||||| || || |||||||| ||||| ||||||||||||||||||||||| ||| Sbjct 140648 GAGAACTTTCCTTTTAATGACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAG 140589 Query 1464 ATGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCGTG 1523 ||||| |||||||| || |||| || || ||||| || ||||| | |||| | || Sbjct 140588 ATGACGGCCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTC 140529 Query 1524 GACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCAAC 1583 ||||||||||| ||| ||| | ||||| |||| || || || ||||||||||||||| Sbjct 140528 GACCAGAAATGTAAGGCCTTGCAGCAGATTGACCAGATGCCGGTCATCGTCACCTCCAAC 140469 Query 1584 ACCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCAGCCGTTG 1643 ||||||||||| || || || ||||| || | || || ||||| || |||||||| || Sbjct 140468 ACCAACATGTGTGCGGTCATCGACGGAAATGCCACCACGTTCGAGCATCAGCAGCCCCTG 140409 Query 1644 CAAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGGGAAGGTC 1703 | || ||||||||||||||||||||||||| | || |||||||||||||||| || Sbjct 140408 GAGGATCGGATGTTCAAATTTGAACTCACCCATAGACTCAATCATGACTTTGGGAAAATC 140349 Query 1704 ACCAAGCAGGA 1714 |||| |||| Sbjct 140348 TCCAAAGAGGA 140338 Score = 131 bits (144), Expect = 5e-27 Identities = 203/289 (70%), Gaps = 1/289 (0%) Strand=Plus/Minus Query 2309 AGCGGCATAAGGACGACAGCAGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCT 2368 ||| ||| ||||| | | | || || || ||||||| |||||||| || || || | Sbjct 139689 AGCAGCACCAGGACCAGGCCCGAGGGCTCGTTGTTCCTGGTTACAAGTATCTAGGCCCTT 139630 Query 2369 TCAACGGACTCGACAAGGGAGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGAGCACG 2428 | ||||| || |||||||| || || ||||| | || |||| || || ||| ||||| Sbjct 139629 TTAACGGTCTAGACAAGGGGGAACCCGTCAATAAAGCCGACGAGGCTGCTCTCC-GCACG 139571 Query 2429 ACAAAGCCTACGACCGGCAGCTCGACAGCGGAGACAACCCGTACCTCAAGTACAACCACG 2488 |||| || ||||| ||||||| | || || || || |||||||| ||||| |||| Sbjct 139570 ACAAGGCATACGAAGAGCAGCTCAAGGCAGGCGATAAACCCTACCTCAAATACAATCACG 139511 Query 2489 CCGACGCGGAGTTTCAGGAGCGCCTTAAAGAAGATACGTCTTTTGGGGGCAACCTCGGAC 2548 | ||||||||||||||| || | || ||| || | || | | ||| ||| || | Sbjct 139510 CGGACGCGGAGTTTCAGCAGAGACTCCAAGGCGACAGCTCCCTAGCGGGAAACGCCGCAA 139451 Query 2549 GAGCAGTCTTCCAGGCGAAAAAGAGGGTTCTTGAACCTCTGGGCCTGGT 2597 || | ||||||| || ||| |||| | || || || || ||||| Sbjct 139450 ACGCGCTTTTCCAGGTCAAGAAGCGGGTCTTAGAGCCCCTTGGTCTGGT 139402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14856448479120