Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq5234 194 5e-46 >seq5234 Length=178527 Score = 194 bits (214), Expect = 5e-46 Identities = 227/307 (74%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 1453 TGAATAACTACAACCCTCAATACATAGGAAGTATCCTGTGCGGCTGGGTGAAGAGAGAGT 1512 ||||| |||| | || | ||| |||||| | ||| ||||||| || |||| Sbjct 140821 TGAATGGCTACTATCCCAAGTACGCCGGAAGTCTTCTGGTCGGCTGGTGCCGGAAGGAGT 140762 Query 1513 TCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATTG 1572 ||| | ||| |||| ||||| | ||||| || || ||||| ||||||||||| | Sbjct 140761 ATGGCAAGCGGAACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACATCG 140702 Query 1573 CAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACT 1632 | || || || || ||||| || || ||||| |||| || |||||||| || ||||||| Sbjct 140701 CGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGAACT 140642 Query 1633 TTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACTA 1692 ||||||||||||| ||||| || |||||| |||| |||||||||||||| || ||||| Sbjct 140641 TTCCTTTTAATGACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGACGG 140582 Query 1693 ATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCTGCTGTCCGGGTAGACCAGA 1752 ||||| || | |||||||| || || ||||||| || || | || ||||||| Sbjct 140581 CCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACCAGA 140522 Query 1753 AATGTAA 1759 ||||||| Sbjct 140521 AATGTAA 140515 Score = 100 bits (110), Expect = 9e-18 Identities = 177/257 (69%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2602 TTCCTGGCTATAAGTATCTTGGGCCTGGTAACGGCCTGGATAAAGGCCCACCTGTCAATA 2661 ||||||| || |||||||| || ||| |||||| || || || || ||| ||||||| Sbjct 139656 TTCCTGGTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATA 139597 Query 2662 AGGCGGACAGCGTCGCGCTTGAACACGACAAGGCCTATGACCAGCAGCTTAAAGCGGGAG 2721 | || ||| | || || ||||||||||| || || ||||||| || || || | Sbjct 139596 AAGCCGACGAGGCTGCTCTCCG-CACGACAAGGCATACGAAGAGCAGCTCAAGGCAGGCG 139538 Query 2722 ACAACCCATATATAAAATTCAATCACGCTGACCAGGACTTTATAGATAGCCTCCAAGACG 2781 | || || || | |||| ||||||||| ||| ||| ||| | || ||||||| || Sbjct 139537 ATAAACCCTACCTCAAATACAATCACGCGGACGCGGAGTTTCAGCAGAGACTCCAAGGCG 139478 Query 2782 ACCAGTCATTCGGAGGTAATCTTGGAAAGGCTGTATTTCAGGCCAAAAAACGTATCTTAG 2841 || || | | || || | ||| || | || |||| ||| || || |||||| Sbjct 139477 ACAGCTCCCTAGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAAGAAGCGGGTCTTAG 139418 Query 2842 AGCCATTTGGCCTAGTA 2858 |||| |||| || ||| Sbjct 139417 AGCCCCTTGGTCTGGTA 139401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16222448371580