Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq5234 455 1e-124 >seq5234 Length=178527 Score = 455 bits (504), Expect = 1e-124 Identities = 681/959 (71%), Gaps = 46/959 (5%) Strand=Plus/Minus Query 782 CTACCTGCTCCCCAAGACCCAGCCCGAGCTCCAGTGGGCGTGGACTAACATGGACCAG-- 839 ||| ||||| |||||| ||| | ||||| |||||||||||||||||| || |||| Sbjct 141279 CTATCTGCTGCCCAAGGTCCAATCAGAGCTGCAGTGGGCGTGGACTAACCTG--CCAGAC 141222 Query 840 TATTTAAGCGCCTGTTTGAATCTCGCGGAGCGTAAACGGCTGGTGGCGCAGCATCTGAC- 898 ||| ||||||| | ||||||| ||| || |||||||||||| | | ||||| Sbjct 141221 TATATAAGCGCAGCCCTCAATCTCGAGGAACGCAAACGGCTGGTGACTTTGT-TCTGAGA 141163 Query 899 GCACGTGT-CGC-AGA-CGCAGGAGC------------------AGAACAAAGAGAATCA 937 ||| || ||| || ||| ||||| || ||||||| ||| Sbjct 141162 GCAGTTGCGCGCTAGCTCGCTGGAGCTCCCGCCTCAGTCCCAGGAGGACAAAGAAAATTT 141103 Query 938 GAACCCCAATTCTGACGCGCCGGTCATCAGGTCAAAAACCTCAGCCAGGTACATGGAGCT 997 | |||| ||| || || ||| ||| | | || | ||||||||||| Sbjct 141102 GGACCCGAATCCTA--------GTTGGAAGGG-AAAGGCGACCGCGAAATACATGGAGCT 141052 Query 998 GGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGATTCAGGAGGACCA 1057 |||| ||| ||||||| |||||||| || || | ||||| | |||||||| Sbjct 141051 GGTCAAATGGTTGGTGGAGAAGGGGATCACCTCGGAGCGAGAGTGGATCCGCGAGGACCA 140992 Query 1058 GGCCTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCAGATCAAGGCCGCGCT 1117 | || ||| ||||||||||| | | || ||||| ||||| ||||| || || Sbjct 140991 AGAGTCCTACCTCTCCTTCAACTCGACGGGCACGGCGCGGGGGCAGATTAAGGCTGCCCT 140932 Query 1118 GGACAATGCCTCCAAGATCATGAGCCTGACAA---AGACGGCTCCGGACTACCTGGTGGG 1174 |||||| || | |||||| |||||| || ||| | |||||||| | || Sbjct 140931 GGACAACGCAGGCCGCATCATGG---TGACAACTAAGTTGGCCGCCGACTACCTAATCGG 140875 Query 1175 CAGCAACCCGCCGGAGGACATTACCAAAAATCGGATCTACCAAATCCTGGAGCTGAACGG 1234 | || ||| || ||||| ||| ||| || |||||| ||| | || ||||| || Sbjct 140874 CCGCGTGGTGCCCGATGACATCACCGGAAACCGTGTCTACCGGATCTTCGACCTGAATGG 140815 Query 1235 GTACGATCCGCAGTACGCGGCCTCCGTCTTCCTG--GGCTGGGCGCAAAAGAAGTTCGGG 1292 ||| |||| ||||||| | |||||| | |||||| | ||| ||| || Sbjct 140814 CTACTATCCCAAGTACGCCGGAA--GTCTTCTGGTCGGCTGGTGCCGGAAGGAGTATGGC 140757 Query 1293 AAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAA 1352 ||| |||||||||||||||| ||||| || || || || || || |||||||||||||| Sbjct 140756 AAGCGGAACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACATCGCGGAG 140697 Query 1353 GCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCAATGAGAACTTTCCC 1412 |||||||| || || || || |||||| ||||||| ||||||||||| ||||||||||| Sbjct 140696 GCCATCGCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGAACTTTCCT 140637 Query 1413 TTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAG 1472 || || || || || ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 140636 TTTAATGACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGACGGCCAAG 140577 Query 1473 GTCGTGGAGAGCGCCAAGGCCATTCTGGGCGGAAGCAAGGTGCGCGTGGACCAAAAGTGC 1532 || || || || |||||||| ||||| || | |||| | || ||||| || || Sbjct 140576 GTGGTCCAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACCAGAAATGT 140517 Query 1533 AAGTCATCGGCCCAGATCGAACCCACTCCCGTGATCGTCACCTCCAACACCAACATGTGC 1592 ||| | | | ||||| || | | || || |||||||||||||||||||||||||| Sbjct 140516 AAGGCCTTGCAGCAGATTGACCAGATGCCGGTCATCGTCACCTCCAACACCAACATGTGT 140457 Query 1593 GCCGTGATTGACGGGAACAGCACCACCTTCGAGCATCAGCAGCCGCTGCAGGACCGGATG 1652 || || || ||||| || |||||| ||||||||||||||||| ||| |||| |||||| Sbjct 140456 GCGGTCATCGACGGAAATGCCACCACGTTCGAGCATCAGCAGCCCCTGGAGGATCGGATG 140397 Query 1653 TTTGAATTTGAACTTACCCGCCGTTTGGACCATGACTTTGGGAAGGTCACCAAACAGGA 1711 || |||||||||| |||| | | | |||||||||||||| || ||||| |||| Sbjct 140396 TTCAAATTTGAACTCACCCATAGACTCAATCATGACTTTGGGAAAATCTCCAAAGAGGA 140338 Score = 172 bits (190), Expect = 2e-39 Identities = 220/302 (73%), Gaps = 1/302 (0%) Strand=Plus/Minus Query 2302 CCCAAAGCGAACCAACAACACCAGGACAACCGTCGGGGTCTTGTGCTTCCGGGTTACAAA 2361 ||||| | |||||| || ||||||||| | || || || || |||| |||||||| Sbjct 139702 CCCAAGGGGAACCAGCAGCACCAGGACCAGGCCCGAGGGCTCGTTGTTCCTGGTTACAAG 139643 Query 2362 TACCTCGGACCCGGTAACGGACTCGACAAAGGAGAGCCGGTCAACGAGGCGGACGCGGCA 2421 || || || || |||||| || ||||| || || || ||||| | || |||| ||| Sbjct 139642 TATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATAAAGCCGACGAGGCT 139583 Query 2422 GCCCTCGAACACGACAAAGCTTACGACCAGCAGCTCAAGGCCGGTGACAACCCGTACCTC 2481 || ||| |||||||| || ||||| ||||||||||||| || || || || |||||| Sbjct 139582 GCTCTCCG-CACGACAAGGCATACGAAGAGCAGCTCAAGGCAGGCGATAAACCCTACCTC 139524 Query 2482 AAGTACAACCACGCCGACGCCGAGTTTCAGGAGCGTCTTCAAGAAGATACGTCTTTTGGG 2541 || ||||| ||||| ||||| ||||||||| || | || |||| || | || | | | Sbjct 139523 AAATACAATCACGCGGACGCGGAGTTTCAGCAGAGACTCCAAGGCGACAGCTCCCTAGCG 139464 Query 2542 GGCAACCTTGGCAGAGCAGTCTTCCAGGCCAAAAAGAGGATCCTTGAGCCTCTTGGTCTG 2601 || ||| | | || | ||||||| ||| ||| || || | ||||| ||||||||| Sbjct 139463 GGAAACGCCGCAAACGCGCTTTTCCAGGTCAAGAAGCGGGTCTTAGAGCCCCTTGGTCTG 139404 Query 2602 GT 2603 || Sbjct 139403 GT 139402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15006804439180