Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq5234 504 2e-139 >seq5234 Length=178527 Score = 504 bits (558), Expect = 2e-139 Identities = 545/720 (76%), Gaps = 4/720 (1%) Strand=Plus/Minus Query 996 CCGCGCGCTACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGC 1055 ||||| ||||||||||||||| ||| ||||||| ||| |||||||| ||| Sbjct 141070 CCGCGAAATACATGGAGCTGGTCAAATGGTTGGTGGAGAAGGGGATCACCTCGGAGCGAG 141011 Query 1056 AGTGGATCCAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCTTCCAACTCGCGGT 1115 ||||||||| |||||||| | || ||| ||||||||||| | | || ||||| Sbjct 141010 AGTGGATCCGCGAGGACCAAGAGTCCTACCTCTCCTTCAACTCGACGGGCACGGCGCGGG 140951 Query 1116 CCCAGATCAAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGC 1175 ||||| ||||| || |||||||| || ||| ||||||| | || || | || Sbjct 140950 GGCAGATTAAGGCTGCCCTGGACAACGCAGGCCGCATCATGGTGACAACTAAGTTGGCCG 140891 Query 1176 CCGACTACCTGGTAGGCCCCGCTCCGCCCGCGGACATTAAAACCAACCGCATCTACCGCA 1235 |||||||||| | |||| || ||||| ||||| | ||||| ||||||| | Sbjct 140890 CCGACTACCTAATCGGCCGCGTGGTGCCCGATGACATCACCGGAAACCGTGTCTACCGGA 140831 Query 1236 TCCTGGAGCTGAACGGCTACGAACCTGCCTACGCCGGCTCCGTCTTTC--TCGGCTGGGC 1293 || | || ||||| |||||| | || |||||||| ||||| |||||||| Sbjct 140830 TCTTCGACCTGAATGGCTACTATCCCAAGTACGCCGGAA--GTCTTCTGGTCGGCTGGTG 140773 Query 1294 CCAGAAAAGGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCACCACGGGCAA 1353 || ||| || || ||||| |||||||||||||||||||| || || || || || || Sbjct 140772 CCGGAAGGAGTATGGCAAGCGGAACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAA 140713 Query 1354 GACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGAC 1413 ||||||||||||||| |||||||| || || || || |||||| |||||||||||||||| Sbjct 140712 GACCAACATCGCGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGAC 140653 Query 1414 CAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGG 1473 ||| ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| Sbjct 140652 CAACGAGAACTTTCCTTTTAATGACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGG 140593 Query 1474 CAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTGCG 1533 ||||||||||||||||| || |||| || |||||||| || || ||| | |||| | Sbjct 140592 TAAGATGACGGCCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAG 140533 Query 1534 CGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTC 1593 || ||||| || || ||| | | ||||| |||| | || || ||||||||||| Sbjct 140532 AGTCGACCAGAAATGTAAGGCCTTGCAGCAGATTGACCAGATGCCGGTCATCGTCACCTC 140473 Query 1594 CAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCC 1653 ||||||||||||||| || || || ||||| || |||||| |||||||| |||||||| Sbjct 140472 CAACACCAACATGTGTGCGGTCATCGACGGAAATGCCACCACGTTCGAGCATCAGCAGCC 140413 Query 1654 GTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCATGACTTTGGCAA 1713 || |||| ||||||||||||||||||||||||| | || | ||||||||||| || Sbjct 140412 CCTGGAGGATCGGATGTTCAAATTTGAACTCACCCATAGACTCAATCATGACTTTGGGAA 140353 Score = 187 bits (206), Expect = 7e-44 Identities = 228/310 (74%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 2308 CCCCGAAGCCCAAAGCCAACCAGCAAAAGCAGGACGACGGCCGGGGTCTGGTGCTTCCTG 2367 ||||||||||||| | |||||||| | |||||| | | ||| || || || |||||| Sbjct 139710 CCCCGAAGCCCAAGGGGAACCAGCAGCACCAGGACCAGGCCCGAGGGCTCGTTGTTCCTG 139651 Query 2368 GCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGG 2427 | |||||||| || || || || ||||| || ||||||||||| |||||||| || | Sbjct 139650 GTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATAAAGCCG 139591 Query 2428 ACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAAGCGGGTGACAATC 2487 ||| || || ||| |||||||||||| ||||| |||||||||| || || || || | Sbjct 139590 ACGAGGCTGCTCTC-CGCACGACAAGGCATACGAAGAGCAGCTCAAGGCAGGCGATAAAC 139532 Query 2488 CGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGT 2547 | ||||| || || ||||| ||||| ||||||||| || | || |||| || | | Sbjct 139531 CCTACCTCAAATACAATCACGCGGACGCGGAGTTTCAGCAGAGACTCCAAGGCGACAGCT 139472 Query 2548 CTTTTGGGGGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAAGCGGGTTCTCGAACCTC 2607 | | | ||| ||| || || | ||||||| |||||||||||| | || || | Sbjct 139471 CCCTAGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAAGAAGCGGGTCTTAGAGCCCC 139412 Query 2608 TCGGTCTGGT 2617 | |||||||| Sbjct 139411 TTGGTCTGGT 139402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14981211935340