Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_004828.1 Length=4694 Score E Sequences producing significant alignments: (Bits) Value seq5234 363 5e-97 >seq5234 Length=178527 Score = 363 bits (402), Expect = 5e-97 Identities = 392/518 (76%), Gaps = 6/518 (1%) Strand=Plus/Minus Query 1129 AACCGCATCTACAAGATTCTGGAACTGAACCACTACGACCCAGCGTACGTGGGGAGTATT 1188 ||||| ||||| ||| | || ||||| |||| | || ||||| || ||| || Sbjct 140846 AACCGTGTCTACCGGATCTTCGACCTGAATGGCTACTATCCCAAGTACGCCGGAAGTCTT 140787 Query 1189 TTGGTCGGGTGGTGCCAGAAGAAATGGGGCAAGCGAAACACGCTGTGGCTGTTCGGACAT 1248 ||||||| ||||||| |||| | | |||||||| ||||| | |||||||| |||| Sbjct 140786 CTGGTCGGCTGGTGCCGGAAGGAGTATGGCAAGCGGAACACCATCTGGCTGTTTGGACCC 140727 Query 1249 GCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCTATGGA 1308 ||||| ||||| |||||||||||||||||||| || || ||||| || |||||||| | Sbjct 140726 GCGACTACCGGAAAGACCAACATCGCGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGC 140667 Query 1309 TGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAAATGATTATC 1368 ||||| ||||||||||||||||||||||| || || ||||| || || |||||| | ||| Sbjct 140666 TGCGTCAACTGGACCAACGAGAACTTTCCTTTTAATGACTGTGTGGACAAAATGGTGATC 140607 Query 1369 TGGTGGGAGGAGGGCAAAATGACCGCCAAAGTGGTGGAAACAGCCAAGGCGATTCTGGGA 1428 |||||||||||||| || ||||| ||||| ||||| | | || ||||| || |||||| Sbjct 140606 TGGTGGGAGGAGGGTAAGATGACGGCCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGA 140547 Query 1429 GGATCTCGGGTGAGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCGACGCCG 1488 || || ||||||||| ||||| ||||| || || | | | ||| || | || |||| Sbjct 140546 GGCTCAATGGTGAGAGTCGACCAGAAATGTAAGGCCTTGCAGCAGATTGACCAGATGCCG 140487 Query 1489 GTCATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGACCACGTTC 1548 ||||| | ||| ||||||||||||||| ||||||||||| || | ||||||||| Sbjct 140486 GTCATCGTCACCTCCAACACCAACATGTGTGCGGTCATCGACGGAAATGCCACCACGTTC 140427 Query 1549 GAGCATAAGCAGCCGTTGGAGGACAGGATGTTTAAGCTCGAATTGCTGAC---TCGGTTG 1605 |||||| ||||||| ||||||| ||||||| || | ||| || || | | | Sbjct 140426 GAGCATCAGCAGCCCCTGGAGGATCGGATGTTCAAATTTGAA---CTCACCCATAGACTC 140370 Query 1606 CCTGATGACTTTGGTAAGGTGACCAAACAGGAGGTGCG 1643 | |||||||||| || | ||||| ||||| |||| Sbjct 140369 AATCATGACTTTGGGAAAATCTCCAAAGAGGAGATGCG 140332 Score = 104 bits (114), Expect = 7e-19 Identities = 188/270 (70%), Gaps = 5/270 (2%) Strand=Plus/Minus Query 2404 GAGGTCTCGTGTTCCCAGGCTACAATTATCTAGGCCCTTTCAACGGTCTAGATAAAGGAG 2463 |||| ||||| | || || ||||| |||||||||||||| ||||||||||| || || | Sbjct 139668 GAGGGCTCGTTGTTCCTGGTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGG 139609 Query 2464 AACCCGTCAACGAGGCAGACGCTGCCGC-CTTAGAACACGACAAGGCTTACGACCTCGAA 2522 |||||||||| | || |||| || || || | ||||||||||| ||||| | Sbjct 139608 AACCCGTCAATAAAGCCGACGAGGCTGCTCTCCG--CACGACAAGGCATACGAAGAGCAG 139551 Query 2523 ATCAAGGACGGGCACAACCCGTACTTTGAGTACAACGAGGCCGAC-AGACGTTTCCAGGA 2581 |||||| || | || || ||| | | ||||| | || ||| | |||| ||| | Sbjct 139550 CTCAAGGCAGGCGATAAACCCTACCTCAAATACAATCACGCGGACGCGGAGTTT-CAGCA 139492 Query 2582 ACGTCTCAAAGACGATACCTCCTTTGGAGGCAATTTAGGTAAAGCCATCTTCCAGGCCAA 2641 | ||| ||| ||| | |||| | | || || | || || | ||||||| ||| Sbjct 139491 GAGACTCCAAGGCGACAGCTCCCTAGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAA 139432 Query 2642 AAAGAGGGTTCTCGAACCCTTTGGTCTGGT 2671 ||| |||| | || ||| |||||||||| Sbjct 139431 GAAGCGGGTCTTAGAGCCCCTTGGTCTGGT 139402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14904434423820