Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq5234 174 5e-40 >seq5234 Length=178527 Score = 174 bits (192), Expect = 5e-40 Identities = 179/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 1539 CCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCC 1598 |||| ||||| | ||||| ||||| ||||||||||||||||| || ||||| || || | Sbjct 140746 CCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACATCGCGGAGGCCATCGCGC 140687 Query 1599 ATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACT 1658 |||| || || ||||| |||| || |||||||| || |||||||| || |||||||||| Sbjct 140686 ATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGAACTTTCCTTTTAATGACT 140627 Query 1659 GCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTGGAAT 1718 | || || |||||| | || |||||||||||||| || ||||| || || || | | Sbjct 140626 GTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGACGGCCAAGGTGGTCCAGT 140567 Query 1719 CCGCAAAAGCGATACTgggggggTCTGCTGTACGAGTTGATCAAAAGTGTAAGG 1772 | ||||| || || ||||| || || || |||| || || || ||||||| Sbjct 140566 CTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACCAGAAATGTAAGG 140513 Score = 93.3 bits (102), Expect = 1e-15 Identities = 112/151 (74%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 2613 TTCCTGGCTATAAGTATGTTGGGCCTGGTAACGGCCTTGATAAAGGGCCACCTGTCAATA 2672 ||||||| || |||||| | || ||| |||||| || || || ||| ||| ||||||| Sbjct 139656 TTCCTGGTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATA 139597 Query 2673 AAGCGGACAGCGTCGCGCTTGAGCACGATAAAGCGTACGACCAGCAGCTCAAGGCAGGAG 2732 |||| ||| | || || |||||| || || ||||| |||||||||||||||| | Sbjct 139596 AAGCCGACGAGGCTGCTCTCC-GCACGACAAGGCATACGAAGAGCAGCTCAAGGCAGGCG 139538 Query 2733 ACAACCCCTATATAAAATTTAAGCACGCAGA 2763 | || ||||| | |||| || ||||| || Sbjct 139537 ATAAACCCTACCTCAAATACAATCACGCGGA 139507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16305624009060