Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq5234 515 1e-142 >seq5234 Length=178527 Score = 515 bits (570), Expect = 1e-142 Identities = 679/938 (72%), Gaps = 34/938 (4%) Strand=Plus/Minus Query 798 CTACCTCCTGCCCAAGACCCAGCCCGAGCTGCAGTGGGCGTGGACTAACATGGAGGAGTA 857 ||| || ||||||||| ||| | |||||||||||||||||||||||| || || || Sbjct 141279 CTATCTGCTGCCCAAGGTCCAATCAGAGCTGCAGTGGGCGTGGACTAACCTGCCAGACTA 141220 Query 858 TATAAGCGCGTGTTTGAACCTGGCCGAACGCAAACGGCTCGTGGC------------GCA 905 ||||||||| | || || | |||||||||||||| ||| | ||| Sbjct 141219 TATAAGCGCAGCCCTCAATCTCGAGGAACGCAAACGGCTGGTGACTTTGTTCTGAGAGCA 141160 Query 906 G---CAC-CTGACCCACGTCAGC--CAGACGCAGG---AGCAGAACAAGGAGAATCTGAA 956 | | | || | | | ||| | | | ||| || || |||| || ||| || | Sbjct 141159 GTTGCGCGCTAGCTCGCTGGAGCTCCCGCCTCAGTCCCAGGAGGACAAAGAAAATTTGGA 141100 Query 957 CCCCAATTCTGACGCGCCCGTGATCAGGTCAAAAACCTCCGCGCGCTACATGGAGCTGGT 1016 ||| ||| || || ||| ||| | ||||| |||||||||||||| Sbjct 141099 CCCGAATCCTA--------GTTGGAAGGG-AAAGGCGACCGCGAAATACATGGAGCTGGT 141049 Query 1017 CGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATCCAGGAGGACCAGGC 1076 | ||| ||||||| ||| |||||||| ||| ||||||||| |||||||| | Sbjct 141048 CAAATGGTTGGTGGAGAAGGGGATCACCTCGGAGCGAGAGTGGATCCGCGAGGACCAAGA 140989 Query 1077 CTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCAGATCAAGGCCGCGCTGGA 1136 || ||| ||||||||||| | | || ||||| ||||| ||||| || ||||| Sbjct 140988 GTCCTACCTCTCCTTCAACTCGACGGGCACGGCGCGGGGGCAGATTAAGGCTGCCCTGGA 140929 Query 1137 CAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGACTACCTGGTGGGGCCCTC 1196 ||| || ||| ||||||| | || || | || |||||||||| | || | | Sbjct 140928 CAACGCAGGCCGCATCATGGTGACAACTAAGTTGGCCGCCGACTACCTAATCGGCCGCGT 140869 Query 1197 GCTGCCCGCGGACATTAAAACCAACCGCATCTACCGCATCCTGGAGCTGAACGGGTACGA 1256 | |||||| ||||| | ||||| ||||||| ||| | || ||||| || ||| | Sbjct 140868 GGTGCCCGATGACATCACCGGAAACCGTGTCTACCGGATCTTCGACCTGAATGGCTACTA 140809 Query 1257 TCCTGCCTACGCCGGCTCCGTCTTTC--TCGGCTGGGCCCAGAAAAAGTTCGGGAAGCGC 1314 ||| |||||||| ||||| |||||||| || ||| ||| || ||||| Sbjct 140808 TCCCAAGTACGCCGGAA--GTCTTCTGGTCGGCTGGTGCCGGAAGGAGTATGGCAAGCGG 140751 Query 1315 AACACCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACATTGCGGAAGCCATC 1374 |||||||||||||||||||| ||||| || ||||| ||||||||||| ||||| |||||| Sbjct 140750 AACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACATCGCGGAGGCCATC 140691 Query 1375 GCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAAC 1434 || || || || || |||||| ||||||||||||||||||| ||||||||||| || || Sbjct 140690 GCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGAACTTTCCTTTTAAT 140631 Query 1435 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTG 1494 || || || ||||| ||||||||||||||||||||||| ||||||||||||||||| || Sbjct 140630 GACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGACGGCCAAGGTGGTC 140571 Query 1495 GAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCG 1554 |||| || |||||||| || || ||| | |||| | || ||||| || || ||| | Sbjct 140570 CAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACCAGAAATGTAAGGCC 140511 Query 1555 TCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTG 1614 | ||||| |||| | || || |||||||||||||||||||||||||| || || Sbjct 140510 TTGCAGCAGATTGACCAGATGCCGGTCATCGTCACCTCCAACACCAACATGTGTGCGGTC 140451 Query 1615 ATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGACCGGATGTTCAAA 1674 || ||||| || |||||| |||||||| |||||||| || |||| |||||||||||| Sbjct 140450 ATCGACGGAAATGCCACCACGTTCGAGCATCAGCAGCCCCTGGAGGATCGGATGTTCAAA 140391 Query 1675 TTTGAACTCACCCGCCGTCTGGAGCACGACTTTGGCAA 1712 ||||||||||||| | || | || |||||||| || Sbjct 140390 TTTGAACTCACCCATAGACTCAATCATGACTTTGGGAA 140353 Score = 181 bits (200), Expect = 3e-42 Identities = 227/310 (73%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 2307 CCCCGAAACCCAAAGCCAACCAGCAAAAGCAGGACAACGGCCGGGGTCTGGTGCTTCCTG 2366 ||||||| ||||| | |||||||| | |||||| | | ||| || || || |||||| Sbjct 139710 CCCCGAAGCCCAAGGGGAACCAGCAGCACCAGGACCAGGCCCGAGGGCTCGTTGTTCCTG 139651 Query 2367 GCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGG 2426 | |||||||| || || || || ||||| || ||||||||||| |||||||| || | Sbjct 139650 GTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATAAAGCCG 139591 Query 2427 ACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAAGCGGGTGACAATC 2486 ||| || || ||| |||||||||||| ||||| |||||||||| || || || || | Sbjct 139590 ACGAGGCTGCTCTC-CGCACGACAAGGCATACGAAGAGCAGCTCAAGGCAGGCGATAAAC 139532 Query 2487 CGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGT 2546 | ||||| || || ||||| ||||| ||||||||| || | || |||| || | | Sbjct 139531 CCTACCTCAAATACAATCACGCGGACGCGGAGTTTCAGCAGAGACTCCAAGGCGACAGCT 139472 Query 2547 CATTTGGGGGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAAGCGGGTTCTCGAACCTC 2606 | | | ||| ||| || || | ||||||| |||||||||||| | || || | Sbjct 139471 CCCTAGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAAGAAGCGGGTCTTAGAGCCCC 139412 Query 2607 TCGGTCTGGT 2616 | |||||||| Sbjct 139411 TTGGTCTGGT 139402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14990809124280