Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_006261.1 Length=4393 Score E Sequences producing significant alignments: (Bits) Value seq5234 497 3e-137 >seq5234 Length=178527 Score = 497 bits (550), Expect = 3e-137 Identities = 675/938 (72%), Gaps = 34/938 (4%) Strand=Plus/Minus Query 697 CTACCTCCTGCCCAAGACTCAGCCCGAGCTGCAGTGGGCGTGGACTAACATGGAGGAGTA 756 ||| || ||||||||| || | |||||||||||||||||||||||| || || || Sbjct 141279 CTATCTGCTGCCCAAGGTCCAATCAGAGCTGCAGTGGGCGTGGACTAACCTGCCAGACTA 141220 Query 757 TATAAGCGCGTGCTTGAACCTGGCCGAGCGCAAACGGCTCGTGGC------------GCA 804 ||||||||| | | || || | || ||||||||||| ||| | ||| Sbjct 141219 TATAAGCGCAGCCCTCAATCTCGAGGAACGCAAACGGCTGGTGACTTTGTTCTGAGAGCA 141160 Query 805 G---CAC-CTGACCCACGTCAGC--CAGACGCAGG---AGCAGAACAAGGAGAATCTGAA 855 | | | || | | | ||| | | | ||| || || |||| || ||| || | Sbjct 141159 GTTGCGCGCTAGCTCGCTGGAGCTCCCGCCTCAGTCCCAGGAGGACAAAGAAAATTTGGA 141100 Query 856 CCCCAATTCTGACGCGCCCGTGATCAGGTCAAAAACCTCCGCGCGCTATATGGAGCTGGT 915 ||| ||| || || ||| ||| | ||||| || ||||||||||| Sbjct 141099 CCCGAATCCTA--------GTTGGAAGGG-AAAGGCGACCGCGAAATACATGGAGCTGGT 141049 Query 916 CGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATCCAGGAGGACCAGGC 975 | ||| ||||||| ||| |||||||| ||| ||||||||| |||||||| | Sbjct 141048 CAAATGGTTGGTGGAGAAGGGGATCACCTCGGAGCGAGAGTGGATCCGCGAGGACCAAGA 140989 Query 976 CTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCAGATCAAGGCCGCGCTGGA 1035 || ||| ||||||||||| | | || ||||| ||||| ||||| || ||||| Sbjct 140988 GTCCTACCTCTCCTTCAACTCGACGGGCACGGCGCGGGGGCAGATTAAGGCTGCCCTGGA 140929 Query 1036 CAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGACTACCTGGTGGGGCCCTC 1095 ||| || ||| ||||||| | || || | || |||||||||| | || | | Sbjct 140928 CAACGCAGGCCGCATCATGGTGACAACTAAGTTGGCCGCCGACTACCTAATCGGCCGCGT 140869 Query 1096 GCTGCCCGCGGACATTACCCAGAACCGCATCTACCGCATCCTCGCTCTCAACGGCTACGA 1155 | |||||| ||||| ||| ||||| ||||||| ||| ||| || || |||||| | Sbjct 140868 GGTGCCCGATGACATCACCGGAAACCGTGTCTACCGGATCTTCGACCTGAATGGCTACTA 140809 Query 1156 CCCTGCCTACGCCGGCTCCGTCTTTC--TCGGCTGGGCTCAGAAAAAGTTCGGGAAACGC 1213 || |||||||| ||||| |||||||| | ||| ||| || || || Sbjct 140808 TCCCAAGTACGCCGGAA--GTCTTCTGGTCGGCTGGTGCCGGAAGGAGTATGGCAAGCGG 140751 Query 1214 AACACCATCTGGCTGTTTGGACCCGCCACCACCGGCAAGACCAACATTGCGGAAGCCATC 1273 |||||||||||||||||||||||||| || ||||| ||||||||||| ||||| |||||| Sbjct 140750 AACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACATCGCGGAGGCCATC 140691 Query 1274 GCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAAT 1333 || || || || || |||||| ||||||||||||||||||| ||||||||||| || ||| Sbjct 140690 GCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGAACTTTCCTTTTAAT 140631 Query 1334 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTG 1393 || || || ||||| ||||||||||||||||||||||| ||||||||||||||||| || Sbjct 140630 GACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGACGGCCAAGGTGGTC 140571 Query 1394 GAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCG 1453 |||| || |||||||| || || ||| | |||| | || ||||| || || ||| | Sbjct 140570 CAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACCAGAAATGTAAGGCC 140511 Query 1454 TCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTG 1513 | ||||| |||| | || || |||||||||||||||||||||||||| || || Sbjct 140510 TTGCAGCAGATTGACCAGATGCCGGTCATCGTCACCTCCAACACCAACATGTGTGCGGTC 140451 Query 1514 ATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCTCTCCAGGACCGGATGTTTAAG 1573 || ||||| || |||||| |||||||| |||||||| || |||| |||||||| || Sbjct 140450 ATCGACGGAAATGCCACCACGTTCGAGCATCAGCAGCCCCTGGAGGATCGGATGTTCAAA 140391 Query 1574 TTCGAACTCACCCGCCGTCTGGAGCACGACTTTGGCAA 1611 || |||||||||| | || | || |||||||| || Sbjct 140390 TTTGAACTCACCCATAGACTCAATCATGACTTTGGGAA 140353 Score = 181 bits (200), Expect = 3e-42 Identities = 227/310 (73%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 2206 CCCCGAAGCCCAAAGCCAACCAGCAAAAGCAGGACGACGGCCGGGGTCTGGTGCTTCCTG 2265 ||||||||||||| | |||||||| | |||||| | | ||| || || || |||||| Sbjct 139710 CCCCGAAGCCCAAGGGGAACCAGCAGCACCAGGACCAGGCCCGAGGGCTCGTTGTTCCTG 139651 Query 2266 GCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGG 2325 | |||||||| || || || || ||||| || ||||||||||| |||||||| || | Sbjct 139650 GTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAATAAAGCCG 139591 Query 2326 ACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTGCAGGCGGGTGACAATC 2385 ||| || || ||| |||||||||||| ||||| ||||||| |||| || || || | Sbjct 139590 ACGAGGCTGCTCTC-CGCACGACAAGGCATACGAAGAGCAGCTCAAGGCAGGCGATAAAC 139532 Query 2386 CGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGT 2445 | ||||| || || ||||| ||||| ||||||||| || | || |||| || | | Sbjct 139531 CCTACCTCAAATACAATCACGCGGACGCGGAGTTTCAGCAGAGACTCCAAGGCGACAGCT 139472 Query 2446 CTTTTGGGGGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAAGCGGGTTCTCGAACCTC 2505 | | | ||| ||| || || | ||||||| |||||||||||| | || || | Sbjct 139471 CCCTAGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAAGAAGCGGGTCTTAGAGCCCC 139412 Query 2506 TCGGTCTGGT 2515 | |||||||| Sbjct 139411 TTGGTCTGGT 139402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13941516466840