Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq5234 358 2e-95 >seq5234 Length=178527 Score = 358 bits (396), Expect = 2e-95 Identities = 391/518 (75%), Gaps = 6/518 (1%) Strand=Plus/Minus Query 1129 AACCGCATCTACAAGATTTTGGAACTGAACCACTACGACCCAGCGTACGTGGGGAGTATT 1188 ||||| ||||| ||| || || ||||| |||| | || ||||| || ||| || Sbjct 140846 AACCGTGTCTACCGGATCTTCGACCTGAATGGCTACTATCCCAAGTACGCCGGAAGTCTT 140787 Query 1189 TTGGTCGGGTGGTGCCAGAAGAAATGGGGCAAGCGAAACACGCTGTGGCTGTTCGGACCT 1248 ||||||| ||||||| |||| | | |||||||| ||||| | |||||||| ||||| Sbjct 140786 CTGGTCGGCTGGTGCCGGAAGGAGTATGGCAAGCGGAACACCATCTGGCTGTTTGGACCC 140727 Query 1249 GCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCTATGGA 1308 ||||| ||||| |||||||||||||||||||| || || ||||| || |||||||| | Sbjct 140726 GCGACTACCGGAAAGACCAACATCGCGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGC 140667 Query 1309 TGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATGATTATC 1368 ||||| ||||||||||||||||||||||| || || ||||| || || || ||| | ||| Sbjct 140666 TGCGTCAACTGGACCAACGAGAACTTTCCTTTTAATGACTGTGTGGACAAAATGGTGATC 140607 Query 1369 TGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATTCTGGGA 1428 |||||||| ||||| || ||||| ||||||||||| | | || || || || |||||| Sbjct 140606 TGGTGGGAGGAGGGTAAGATGACGGCCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGA 140547 Query 1429 GGATCTCGGGTGAGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCGACGCCG 1488 || || ||||||||| ||||| ||||| || || | | | ||| || | || |||| Sbjct 140546 GGCTCAATGGTGAGAGTCGACCAGAAATGTAAGGCCTTGCAGCAGATTGACCAGATGCCG 140487 Query 1489 GTCATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGACTACGTTC 1548 ||||| | ||| ||||||||||||||| ||||||||||| || | || |||||| Sbjct 140486 GTCATCGTCACCTCCAACACCAACATGTGTGCGGTCATCGACGGAAATGCCACCACGTTC 140427 Query 1549 GAGCATAAGCAGCCGTTGGAGGACAGGATGTTTAAGCTCGAGCTGTTGACTCGTTTACCC 1608 |||||| ||||||| ||||||| ||||||| || | || | | || | | || | Sbjct 140426 GAGCATCAGCAGCCCCTGGAGGATCGGATGTTCAAATTTGAAC---TCACCCATAGACTC 140370 Query 1609 ---GATGACTTTGGTAAGGTGACCAAACAGGAGGTGCG 1643 |||||||||| || | ||||| ||||| |||| Sbjct 140369 AATCATGACTTTGGGAAAATCTCCAAAGAGGAGATGCG 140332 Score = 114 bits (126), Expect = 4e-22 Identities = 190/268 (71%), Gaps = 5/268 (2%) Strand=Plus/Minus Query 2407 GAGGTCTCGTGTTCCCGGGTTACAAGTATCTAGGCCCTTTCAACGGTCTAGATAAAGGAA 2466 |||| ||||| | || ||||||||||||||||||||||| ||||||||||| || || Sbjct 139668 GAGGGCTCGTTGTTCCTGGTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGG 139609 Query 2467 AACCCGTCAACGAGGCAGACGCTGCCGCCTTAGAGCACGACAAGGCTTACGACCTCGAAC 2526 |||||||||| | || |||| || | || |||||||||||| ||||| | | Sbjct 139608 AACCCGTCAATAAAGCCGACGAGGCTG-CTCTCCGCACGACAAGGCATACGAAGAGCAGC 139550 Query 2527 TCAAGGACGGGCACAACCCGTACTTTGAGTACAACGAGGCCGA-TAGACGTTTCCAGGAA 2585 |||||| || | || || ||| | | ||||| | || || | |||| ||| | Sbjct 139549 TCAAGGCAGGCGATAAACCCTACCTCAAATACAATCACGCGGACGCGGAGTTT-CAGCAG 139491 Query 2586 CGTCTCAAAGACGATACCTCTTTCGGAGGGAATCTCGGTAAA-GCCATCTTTCAGGCCAA 2644 | ||| ||| ||| | ||| | | ||||| | | | ||| || | || |||| ||| Sbjct 139490 AGACTCCAAGGCGACAGCTCCCT-AGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAA 139432 Query 2645 AAAGAGGGTCCTCGAGCCCTTTGGTCTG 2672 ||| ||||| | |||||| |||||||| Sbjct 139431 GAAGCGGGTCTTAGAGCCCCTTGGTCTG 139404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14866045668060