Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq5234 446 5e-122 >seq5234 Length=178527 Score = 446 bits (494), Expect = 5e-122 Identities = 539/739 (73%), Gaps = 0/739 (0%) Strand=Plus/Minus Query 846 AATACATGGCGCTCGTCAGGTGGCTCGTGGACAACGGCATCGCGACCGAGCGCGAGTGGA 905 ||||||||| ||| |||| ||| | ||||| || || ||| | | ||||| ||||||| Sbjct 141064 AATACATGGAGCTGGTCAAATGGTTGGTGGAGAAGGGGATCACCTCGGAGCGAGAGTGGA 141005 Query 906 TGCGCGAGGACTCGGACGGGTACCTGAGCTACAACGCCACGGGCGCCACGCGCGCCCAGA 965 | ||||||||| || ||||| || |||| | |||||| | |||| | |||| Sbjct 141004 TCCGCGAGGACCAAGAGTCCTACCTCTCCTTCAACTCGACGGGCACGGCGCGGGGGCAGA 140945 Query 966 TCAAGGCCGCGCTCGACAACGCGGCCCGCATCATGGTCAACACGAAGACGGCCGCCGACT 1025 | ||||| || || |||||||| | |||||||||||| | || ||| ||||||||||| Sbjct 140944 TTAAGGCTGCCCTGGACAACGCAGGCCGCATCATGGTGACAACTAAGTTGGCCGCCGACT 140885 Query 1026 ACCTGGTCGGCAGGAACCCGCCCCTCGACGTGGAGGACAACAGGATCTACCGGCTGTTTC 1085 |||| ||||| | |||| ||| | | ||| | |||||||| | || Sbjct 140884 ACCTAATCGGCCGCGTGGTGCCCGATGACATCACCGGAAACCGTGTCTACCGGATCTTCG 140825 Query 1086 GCATGAACGGCTACGACCCCGCCTACGCGGGCAGCGTGCTGCTCGGCTGGTGCCGCACCG 1145 | |||| |||||| | ||| ||||| || || | ||| ||||||||||||| | | Sbjct 140824 ACCTGAATGGCTACTATCCCAAGTACGCCGGAAGTCTTCTGGTCGGCTGGTGCCGGAAGG 140765 Query 1146 GCTTCGGCAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACGAACC 1205 | |||||||| |||||| ||||||| || || || || || ||||| ||||| ||| Sbjct 140764 AGTATGGCAAGCGGAACACCATCTGGCTGTTTGGACCCGCGACTACCGGAAAGACCAACA 140705 Query 1206 TCGCCGAGGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAACGAGA 1265 |||| ||||||||| || |||| || |||||| |||||||||||||||||||||||| Sbjct 140704 TCGCGGAGGCCATCGCGCATGCGGTCCCGTTCTACAGCTGCGTCAACTGGACCAACGAGA 140645 Query 1266 ACTTCCCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAGATGA 1325 |||| || || || ||||| |||||||| ||| | ||||||||||||||||| ||||||| Sbjct 140644 ACTTTCCTTTTAATGACTGTGTGGACAAAATGGTGATCTGGTGGGAGGAGGGTAAGATGA 140585 Query 1326 CGTCCAAGGTCGTCGAGAGCGCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGTCGACC 1385 || ||||||| ||| || || ||||||||||| || ||| | |||| | ||||||| Sbjct 140584 CGGCCAAGGTGGTCCAGTCTGCAAAGGCCATCCTGGGAGGCTCAATGGTGAGAGTCGACC 140525 Query 1386 AGAAGTGCAAGAACTCGCAGCAGATCGAGCCCACGCCCGTCATNNNNNNNNNNNNNNNNN 1445 |||| || ||| || ||||||||| || | | ||| ||||| Sbjct 140524 AGAAATGTAAGGCCTTGCAGCAGATTGACCAGATGCCGGTCATCGTCACCTCCAACACCA 140465 Query 1446 ACATGTGCGAGGTCGTCGACGGGAACTCGACCACGTTCGAGCACCGGCAGCCGCTCGAGG 1505 ||||||| | |||| ||||||| || | |||||||||||||| | |||||| || |||| Sbjct 140464 ACATGTGTGCGGTCATCGACGGAAATGCCACCACGTTCGAGCATCAGCAGCCCCTGGAGG 140405 Query 1506 ACAGGATGTTCAAGTTCGAGCTCACCGTCAGGCTGCAGCCCACCTTCGGCAAGATCACCA 1565 | |||||||||| || || |||||| || || | | ||| || || ||| ||| Sbjct 140404 ATCGGATGTTCAAATTTGAACTCACCCATAGACTCAATCATGACTTTGGGAAAATCTCCA 140345 Query 1566 AGCAGGAGGTGCGCGAGTT 1584 | ||||| |||| ||||| Sbjct 140344 AAGAGGAGATGCGGGAGTT 140326 Score = 250 bits (276), Expect = 7e-63 Identities = 321/438 (73%), Gaps = 10/438 (2%) Strand=Plus/Minus Query 2014 TATCGACGACGTCAATAAAGAGCAATAAAATGATTTACAGCAGTCATGTCGTTTGTCGAT 2073 ||| || || | |||||||| || |||||||| | || ||||||||||||||| ||| Sbjct 139836 TATGGATGATTTAAATAAAGAACAGTAAAATGAGTCG-AGTAGTCATGTCGTTTGTTGAT 139778 Query 2074 CACCCCCCAGACTGGCTCGAGGAGATCGGAGAGGGGCTCTCCGAGTTCATCGGACTAGAG 2133 ||||| ||||| ||| | || |||| | ||||| ||| |||||| || || || Sbjct 139777 CACCCTCCAGATTGGTTGGAAGAGACCCTTGAGGGACTCAACGAGTTTCTCCATCTCGAC 139718 Query 2134 GCGGGACCGCCGAAGCCTAAG-----CCGG--GCTACCAGGACCGCGCGCGCGGCCTCGT 2186 ||||| | |||||||| ||| || | || ||||||||| || || || ||||| Sbjct 139717 GCGGGTACCCCGAAGCCCAAGGGGAACCAGCAGC-ACCAGGACCAGGCCCGAGGGCTCGT 139659 Query 2187 CGTCCCCGGCTACAAGTACCTCGGGCCCTTCAACGGACTCGACAGGGGCGAGCCCGTCAA 2246 || || || |||||||| || || || || ||||| || |||| ||| || |||||||| Sbjct 139658 TGTTCCTGGTTACAAGTATCTAGGCCCTTTTAACGGTCTAGACAAGGGGGAACCCGTCAA 139599 Query 2247 CGCGGCCGACGCGGCGGCCAAGAAGCACGACGAGGAGTACGACCGGCTCCTCAAGGCGGG 2306 ||||||| ||| || ||||||| ||| ||||| || |||||||| || Sbjct 139598 TAAAGCCGACGAGGCTGCTCTCC-GCACGACAAGGCATACGAAGAGCAGCTCAAGGCAGG 139540 Query 2307 GGACAACCCGTACCTCGCCTACAACCACGCGGACGCCGAGTTCCAGAAGGACCTCAGCGG 2366 || || || |||||| ||||| ||||||||||| ||||| ||| || ||| || Sbjct 139539 CGATAAACCCTACCTCAAATACAATCACGCGGACGCGGAGTTTCAGCAGAGACTCCAAGG 139480 Query 2367 CGACTCCAGCCTAGCCGGCAACGCCGCGAACGCGCTCTTCCAGGCCAAGAAGAGGGTCCT 2426 |||| | |||||| || |||||||| |||||||| ||||||| ||||||| ||||| | Sbjct 139479 CGACAGCTCCCTAGCGGGAAACGCCGCAAACGCGCTTTTCCAGGTCAAGAAGCGGGTCTT 139420 Query 2427 CGAGCCCTTCGGACTGGT 2444 |||||| | || ||||| Sbjct 139419 AGAGCCCCTTGGTCTGGT 139402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13599216727980