Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq2002 1696 0.0 >seq2002 Length=4243662 Score = 1696 bits (1880), Expect = 0.0 Identities = 1362/1643 (83%), Gaps = 5/1643 (0%) Strand=Plus/Plus Query 47 GACCAAAGGTCGCCCGACGCCCGGGCTTTGCCCGGGCGGCCTCAGTGNNNNNNNNNNNNN 106 |||||||||||||| |||| || ||||||| | ||||| || | Sbjct 1005600 GACCAAAGGTCGCCAGACGGACGCGCTTTGCACATCCGGCCCCACCGAGCGAGCGAGCGC 1005659 Query 107 NNAGAGAGGGAGTGGCCAACTCCATCACTAGGGGTTCCTGGAGGGGTGGAGTCGTGACGT 166 | |||||||| ||||||||||||||||||||||| |||||| |||||| |||||| Sbjct 1005660 GCATAGAGGGAGGGGCCAACTCCATCACTAGGGGTTTGGCGAGGGGAGGAGTCATGACGT 1005719 Query 167 GAATTACGTCATAGGGTTAGGGAGGTCCTGTATTAGAGGTCACGTGAGTG-TTTTGCGAC 225 | | |||||| ||||||||| |||||| ||||||| ||||||||||||| ||||||||| Sbjct 1005720 AAGTGACGTCACAGGGTTAGGCAGGTCCGGTATTAGGGGTCACGTGAGTGCTTTTGCGAC 1005779 Query 226 ATTTTGCGACACCATGTGGTCACGCTGGGTATTTAAGCCCGAGTGAGCACGCAGGGTCTC 285 |||||||||||||| ||||||| || |||||| |||||||||||||||| ||| | ||| Sbjct 1005780 ATTTTGCGACACCACGTGGTCAGGCAGGGTATATAAGCCCGAGTGAGCATGCACAGGCTC 1005839 Query 286 CATTTTGAAGCGGGAGGTTTGAACGCGCAGCCGCCATGCCGGGGTTTTACGAGATTGTGA 345 |||||| ||| | || || | ||||| ||||||| ||| || ||||||||||||| Sbjct 1005840 CATTTTCCCGCGAAA--TTCAAAGGAGCAGCAGCCATGCTGGGCTTCTACGAGATTGTGA 1005897 Query 346 TTAAGGTCCCCAGCGACCTTGACGAGCATCTGCCCGGCATTTCTGACAGCTTTGTGAACT 405 | ||| |||| || ||||| ||||||||| | || || |||||||||||||||||||||| Sbjct 1005898 TGAAGATCCCTAGTGACCTGGACGAGCATTTACCGGGTATTTCTGACAGCTTTGTGAACT 1005957 Query 406 GGGTGGCCGAGAAGGAATGGGAGTTGCCGCCAGATTCTGACATGGATCTGAATCTGATTG 465 ||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||| Sbjct 1005958 GGGTGGCTGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTG 1006017 Query 466 AGCAGGCACCCCTGACCGTGGCCGAGAAGCTGCAGCGCGACTTTCTGACGGAATGGCGCC 525 ||||| ||||||||||| ||||||| ||||| ||| |||||||||||||||||||||||| Sbjct 1006018 AGCAGACACCCCTGACCATGGCCGAAAAGCTACAGTGCGACTTTCTGACGGAATGGCGCC 1006077 Query 526 GTGTGAGTAAGGCCCCGGAGGCCCTTTTCTTTGTGCAATTTGAGAAGGGAGAGAGCTACT 585 ||||||||||||||||||||||||| || ||||| |||||||| ||||| | | || | Sbjct 1006078 GTGTGAGTAAGGCCCCGGAGGCCCTCTTTTTTGTTCAATTTGAAAAGGGGGCAATCTGTT 1006137 Query 586 TCCACATGCACGTGCTCGTGGAAACCACCGGGGTGAAATCCATGGTTTTGGGACGTTTCC 645 | ||| | |||||||| ||||| || ||||||||||| |||||| | || ||||| Sbjct 1006138 TTCACCTCCACGTGCTTGTGGAGACTACCGGGGTGAAGAGCATGGTGCTAGGCCGTTTTG 1006197 Query 646 TGAGTCAGATTCGCGAAAAACTGATTCAGAGAATTTACCGCGGGATCGAGCCGACTTTGC 705 |||||||||||||||| || ||| ||||| |||||||||||||||||| |||| ||| Sbjct 1006198 TGAGTCAGATTCGCGATAAGCTGGTTCAGCACATTTACCGCGGGATCGAGTCGACCATGC 1006257 Query 706 CAAACTGGTTCGCGGTCACAAAGACCAGAAATGGCGCCGGAGGCGGGAACAAGGTGGTGG 765 | |||||||||||||||||||| | | ||||||||||| ||||||||||||||||||| Sbjct 1006258 CGAACTGGTTCGCGGTCACAAAAATGTGTAATGGCGCCGGTGGCGGGAACAAGGTGGTGG 1006317 Query 766 ATGAGTGCTACATCCCCAATTACTTGCTCCCCAAAACCCAGCCTGAGCTCCAGTGGGCGT 825 | |||||||| || ||||| ||| |||||||||||||||| || || || |||||||||| Sbjct 1006318 ACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAACCCAACCGGAACTTCAGTGGGCGT 1006377 Query 826 GGACTAATATGGAACAGTATTTAAGCGCCTGTTTGAATCTCACGGAGCGTAAACGGTTGG 885 ||||||| ||||| ||||| ||||||| |||| ||| ||| ||||||| |||||| ||| Sbjct 1006378 GGACTAACATGGAGGAGTATATAAGCGCGTGTTCGAACCTCGCGGAGCGCAAACGGCTGG 1006437 Query 886 TGGCGCAGCATCTGACGCACGTGTCGCAGACGCAGGAGCAGAACAAAGAGAATCAGAATC 945 |||| ||||| |||||||| || ||||| ||||||||||||||||| ||| ||| | Sbjct 1006438 TGGCTCAGCACCTGACGCATGTCAGTCAGACTCAGGAGCAGAACAAAGAAAATTTGAACC 1006497 Query 946 CCAATTCTGATGCGCCGGTGATCAGATCAAAAACTTCAGCCAGGTACATGGAGCTGGTCG 1005 | |||||||| ||||| |||||| | |||||||| || | | |||||||||||||||| Sbjct 1006498 CAAATTCTGACGCGCCTGTGATCCGGTCAAAAACCTCCACGCGATACATGGAGCTGGTCG 1006557 Query 1006 GGTGGCTCGTGGACAAGGGGATTACCTCGGAGAAGCAGTGGATCCAGGAGGACCAGGCCT 1065 |||||||||||||||||||||| || || || ||||| |||||||||||||||||||| | Sbjct 1006558 GGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGGCTT 1006617 Query 1066 CATACATCTCCTTCAATGCGGCCTCCAACTCGCGGTCCCAAATCAAGGCTGCCTTGGACA 1125 | |||||||||||||| || | || || || ||||| || || ||||| || ||||||| Sbjct 1006618 CCTACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCAGATTAAGGCCGCTTTGGACA 1006677 Query 1126 ATGCGGGAAAGATTATGAGCCTGACTAAAACCGCCCCCGACTACCTGGTGGGCCAGCAGC 1185 |||| || |||||||||||||| |||| || || ||||||||| | || ||||||| Sbjct 1006678 ATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGACTACCTGATTGGACAGCAGC 1006737 Query 1186 CCGTGGAGGACATT-TCCAGCAATCGGATTTATAAAATTTTGGAACTAAACGGGTACGAT 1244 |||||||||||||| ||| || || ||||| ||||| || | ||||| ||||| Sbjct 1006738 CCGTGGAGGACATTGAGCAG-AACCGCATTTACCGGATTTTACAAATGAACGGCTACGAC 1006796 Query 1245 CCCCAATATGCGGCTTCCGTCTTTCTGGGATGGGCCACGAAAAAGTTCGGCAAGAGGAAC 1304 ||| | || |||| |||||||||||||| ||||| ||| || ||||| ||| |||| Sbjct 1006797 CCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCAGAAGAAATTCGGGAAGCGGAAT 1006856 Query 1305 ACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACCAACATCGCGGAGGCCATAGCC 1364 ||||||||||||||||||||||| || || || ||||||||||| ||||| ||||| || Sbjct 1006857 ACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCATTGCT 1006916 Query 1365 CACACTGTGCCCTTCTACGGGTGCGTAAACTGGACCAATGAGAACTTTCCCTTCAACGAC 1424 ||| | |||||||| ||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct 1006917 CACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCCGTTCAACGAT 1006976 Query 1425 TGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGAAGATGACCGCCAAGGTCGTGGAG 1484 || ||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1006977 TGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTAGAG 1007036 Query 1485 TCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCGTGGACCAGAAATGCAAGTCCTCG 1544 || ||||| ||||| || || || |||||||| | || ||||| || |||||||| ||| Sbjct 1007037 TCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTCGACCAAAAGTGCAAGTCATCG 1007096 Query 1545 GCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGATT 1604 |||||||| ||||| || ||||| ||||| || ||||||||||||||||||| |||||| Sbjct 1007097 GCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCAACATGTGCGTGGTGATT 1007156 Query 1605 GACGGGAACTCAACGACCTTCGAACACCAGCAGCCGTTGCAAGACCGGATGTTCAAATTT 1664 ||| ||||| || ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 1007157 GACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTACAGGACCGGATGTTCAAGTTT 1007216 Query 1665 GAACTCACCCGCCGTCTGGATCA 1687 |||||||||||||||||||| || Sbjct 1007217 GAACTCACCCGCCGTCTGGAACA 1007239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14858716074660