Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq2002 1692 0.0 >seq2002 Length=4243662 Score = 1692 bits (1876), Expect = 0.0 Identities = 1369/1646 (83%), Gaps = 14/1646 (1%) Strand=Plus/Plus Query 47 GACCAAAGGTCGCCAGACGGACGTGCTTTGCACGTCCGGCCCCACCGAGCGAGCGAGTGC 106 ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct 1005600 GACCAAAGGTCGCCAGACGGACGCGCTTTGCACATCCGGCCCCACCGAGCGAGCGAGCGC 1005659 Query 107 GCATAGAGGGAGTGGCCAACTCCATCACTAGAGGTATGGCA--GTGACGTAACGCGAAGC 164 |||||||||||| |||||||||||||||||| ||| |||| | || | | || | Sbjct 1005660 GCATAGAGGGAGGGGCCAACTCCATCACTAGGGGTTTGGCGAGGGGAGGAGTCATGACGT 1005719 Query 165 GCGCGAAGCGAGACCACGCCTAC-CAGCTGCG---TCAGCAGTCAGGTGACC-CTTTTGC 219 | || | | || | || ||| | || | || |||| |||| ||||||| Sbjct 1005720 AAGTGACGTCA---CAGGGTTAGGCAGGTCCGGTATTAGGGGTCACGTGAGTGCTTTTGC 1005776 Query 220 GACAGTTTGCGACACCACGTGGCCGCTGAGGGTATATATTCTCGAGTGAGCGAACCAGGA 279 |||| ||||||||||||||||| | |||||||||| | ||||||||| | || Sbjct 1005777 GACATTTTGCGACACCACGTGGTCAGGCAGGGTATATAAGCCCGAGTGAGC-ATGCACAG 1005835 Query 280 GCTCCATTTTGACCGCGAAATTTGAACGAGCAGCAGCCATGCCGGGGTTCTACGAGATTG 339 |||||||||| |||||||||| || ||||||||||||||| ||| ||||||||||||| Sbjct 1005836 GCTCCATTTTC-CCGCGAAATTCAAAGGAGCAGCAGCCATGCTGGGCTTCTACGAGATTG 1005894 Query 340 TCCTGAAGGTCCCGAGTGACCTGGACGAGCGCCTGCCGGGCATTTCTAACTCGTTTGTTA 399 | ||||| |||| |||||||||||||||| | ||||| |||||| || ||||| | Sbjct 1005895 TGATGAAGATCCCTAGTGACCTGGACGAGCATTTACCGGGTATTTCTGACAGCTTTGTGA 1005954 Query 400 ACTGGGTGGCCGAGAAGGAATGGGACGTGCCGCCGGATTCTGACATGGATCCGAATCTGA 459 |||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct 1005955 ACTGGGTGGCTGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGA 1006014 Query 460 TTGAGCAGGCACCCCTGACCGTGGCCGAAAAGCTTCAGCGCGAGTTCCTGGTGGAGTGGC 519 |||||||| ||||||||||| ||||||||||||| ||| |||| || ||| ||| |||| Sbjct 1006015 TTGAGCAGACACCCCTGACCATGGCCGAAAAGCTACAGTGCGACTTTCTGACGGAATGGC 1006074 Query 520 GCCGCGTGAGTAAGGCCCCGGAGGCCCTCTTTTTTGTCCAGTTCGAAAAGGGGGAGACCT 579 |||| |||||||||||||||||||||||||||||||| || || |||||||||| | || Sbjct 1006075 GCCGTGTGAGTAAGGCCCCGGAGGCCCTCTTTTTTGTTCAATTTGAAAAGGGGGCAATCT 1006134 Query 580 ACTTCCACCTGCACGTGCTGATTGAGACCATCGGGGTCAAATCCATGGTGGTCGGCCGCT 639 || ||||| |||||||| | ||||| | |||||| || ||||||| | ||||| | Sbjct 1006135 GTTTTCACCTCCACGTGCTTGTGGAGACTACCGGGGTGAAGAGCATGGTGCTAGGCCGTT 1006194 Query 640 ACGTGAGCCAGATTAAAGAGAAGCTGGTGACCCGCATCTACCGCGGGGTCGAGCCGCAGC 699 ||||| |||||| || |||||||| | ||| ||||||||| ||||| || Sbjct 1006195 TTGTGAGTCAGATTCGCGATAAGCTGGTTCAGCACATTTACCGCGGGATCGAGTCGACCA 1006254 Query 700 TTCCGAACTGGTTCGCGGTGACCAAAACGCGAAATGGCGCCGGGGGCGGGAACAAGGTGG 759 | ||||||||||||||||| || |||| | | ||||||||||| |||||||||||||||| Sbjct 1006255 TGCCGAACTGGTTCGCGGTCACAAAAATGTGTAATGGCGCCGGTGGCGGGAACAAGGTGG 1006314 Query 760 TGGACGACTGCTACATCCCCAACTACCTGCTCCCCAAGACCCAGCCCGAGCTCCAGTGGG 819 ||||||| ||||| || |||||||||||||||||||| ||||| || || || ||||||| Sbjct 1006315 TGGACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAACCCAACCGGAACTTCAGTGGG 1006374 Query 820 CGTGGACTAACATGGACCAGTATTTAAGCGCCTGTTTGAATCTCGCGGAGCGTAAACGGC 879 |||||||||||||||| ||||| ||||||| |||| ||| ||||||||||| ||||||| Sbjct 1006375 CGTGGACTAACATGGAGGAGTATATAAGCGCGTGTTCGAACCTCGCGGAGCGCAAACGGC 1006434 Query 880 TGGTGGCGCAGCATCTGACGCACGTGTCGCAGACGCAGGAGCAGAACAAAGAGAATCAGA 939 ||||||| ||||| |||||||| || ||||| ||||||||||||||||| ||| || Sbjct 1006435 TGGTGGCTCAGCACCTGACGCATGTCAGTCAGACTCAGGAGCAGAACAAAGAAAATTTGA 1006494 Query 940 ACCCCAATTCTGACGCGCCGGTCATCAGGTCAAAAACCTCAGCCAGGTACATGGAGCTGG 999 |||| |||||||||||||| || ||| ||||||||||||| | | ||||||||||||| Sbjct 1006495 ACCCAAATTCTGACGCGCCTGTGATCCGGTCAAAAACCTCCACGCGATACATGGAGCTGG 1006554 Query 1000 TCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGATTCAGGAGGACCAGG 1059 |||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 1006555 TCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGG 1006614 Query 1060 CCTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCAGATCAAGGCCGCGCTGG 1119 | || ||||||||||||||||||| || || || ||||| ||||| |||||||| ||| Sbjct 1006615 CTTCCTACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCAGATTAAGGCCGCTTTGG 1006674 Query 1120 ACAATGCCTCCAAGATCATGAGCCTGACAAAGACGGCTCCGGACTACCTG-GTGGGCAGC 1178 |||||||||| || || |||||||||||||| | |||||||||||||||| ||| |||| Sbjct 1006675 ACAATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGACTACCTGATTGGACAGC 1006734 Query 1179 AACCCGCCGGAGGACATTACCAAAAATCGGATCTACCAAATCCTGGAGCTGAACGGGTAC 1238 | |||| |||||||||| | || || || |||| || | | ||||||| ||| Sbjct 1006735 AGCCCG-TGGAGGACATTGAGCAGAACCGCATTTACCGGATTTTACAAATGAACGGCTAC 1006793 Query 1239 GATCCGCAGTACGCGGCCTCCGTCTTCCTGGGCTGGGCGCAAAAGAAGTTCGGGAAGAGG 1298 || || ||||| ||||||||||||| ||||||||||| || ||||| ||||||||| || Sbjct 1006794 GACCCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCAGAAGAAATTCGGGAAGCGG 1006853 Query 1299 AACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAAGCCATC 1358 || ||||||||||| |||||||| || || ||||| || |||||||| ||||||||||| Sbjct 1006854 AATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCATT 1006913 Query 1359 GCCCACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCAATGAGAACTTTCCCTTCAAC 1418 || ||||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||| Sbjct 1006914 GCTCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCCGTTCAAC 1006973 Query 1419 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTG 1478 |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1006974 GATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTA 1007033 Query 1479 GAGAGCGCCAAGGCCATTCTGGGCGGAAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCA 1538 ||| ||||||||||| |||||||| |||||||| | || |||||||||||||||||| Sbjct 1007034 GAGTCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTCGACCAAAAGTGCAAGTCA 1007093 Query 1539 TCGGCCCAGATCGAACCCACTCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTG 1598 |||||||||||||| ||||| ||||| ||||| || ||||||||||||||||||| ||| Sbjct 1007094 TCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCAACATGTGCGTGGTG 1007153 Query 1599 ATTGACGGGAACAGCACCACCTTCGAGCATCAGCAGCCGCTGCAGGACCGGATGTTTGAA 1658 |||||| |||||||||||||||| ||||| ||||||||| | |||||||||||||| | Sbjct 1007154 ATTGACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTACAGGACCGGATGTTCAAG 1007213 Query 1659 TTTGAACTTACCCGCCGTTTGGACCA 1684 |||||||| ||||||||| |||| || Sbjct 1007214 TTTGAACTCACCCGCCGTCTGGAACA 1007239 Score = 125 bits (138), Expect = 2e-25 Identities = 75/79 (95%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 4648 GACCAAAGGTCGCCAGACGGACGTGCTTTGCACGTCCGGCCCCACCGAGCGAGCGAGTGC 4707 ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct 1005600 GACCAAAGGTCGCCAGACGGACGCGCTTTGCACATCCGGCCCCACCGAGCGAGCGAGCGC 1005659 Query 4708 GCATAGAGGGAGTGGCCAA 4726 |||||||||||| |||||| Sbjct 1005660 GCATAGAGGGAGGGGCCAA 1005678 Score = 102 bits (112), Expect = 2e-18 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 4578 CTCGCCATACCTCTAGTGATGGAGTTGGCCACTCCCTCTATGCGCACTCGCTCGCTCGGT 4637 ||||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 1005702 CTCGCCAAACCCCTAGTGATGGAGTTGGCCCCTCCCTCTATGCGCGCTCGCTCGCTCGGT 1005643 Query 4638 GGGGCC 4643 |||||| Sbjct 1005642 GGGGCC 1005637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15009094984115