Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq2002 1575 0.0 >seq2002 Length=4243662 Score = 1575 bits (1746), Expect = 0.0 Identities = 1244/1483 (84%), Gaps = 6/1483 (0%) Strand=Plus/Plus Query 259 CACGTG-GTCCGTTTGCGACAGTTTGCGACACCATGTGGTCAGG-AGGGTATATAACCGC 316 |||||| || | ||||||||| |||||||||||| ||||||||| ||||||||||| | | Sbjct 1005760 CACGTGAGTGCTTTTGCGACATTTTGCGACACCACGTGGTCAGGCAGGGTATATAAGCCC 1005819 Query 317 GAGTGAGCCAGCGAGGAGCTCCATTTTGCCCGCGAATTTTGAACGAGCAGCAGCCATGCC 376 |||||||| || | |||||||||| |||||||| || || ||||||||||||||| Sbjct 1005820 GAGTGAGCATGCACAG-GCTCCATTTT-CCCGCGAAATTCAAAGGAGCAGCAGCCATGCT 1005877 Query 377 GGGGTTCTACGAGATCGTGCTGAAGGTGCCCAGCGACCTGGACGAGCACCTGCCCGGCAT 436 ||| ||||||||||| ||| ||||| | || || |||||||||||||| | || || || Sbjct 1005878 GGGCTTCTACGAGATTGTGATGAAGATCCCTAGTGACCTGGACGAGCATTTACCGGGTAT 1005937 Query 437 TTCTGACTCTTTTGTGAGCTGGGTGGCCGAGAAGGAATGGGAGCTGCCGCCGGATTCTGA 496 ||||||| ||||||| ||||||||| ||||||||||||||| |||| ||||||||||| Sbjct 1005938 TTCTGACAGCTTTGTGAACTGGGTGGCTGAGAAGGAATGGGAGTTGCCCCCGGATTCTGA 1005997 Query 497 CATGGACTTGAATCTGATTGAGCAGGCACCCCTGACCGTGGCCGAAAAGCTGCAACGCGA 556 |||||| |||||||||||||||| ||||||||||| ||||||||||||| || |||| Sbjct 1005998 CATGGATCAGAATCTGATTGAGCAGACACCCCTGACCATGGCCGAAAAGCTACAGTGCGA 1006057 Query 557 GTTCCTGGTCGAGTGGCGCCGCGTGAGTAAGGCCCCGGAGGCCCTCTTCTTTGTCCAGTT 616 || ||| || |||||||| |||||||||||||||||||||||||| ||||| || || Sbjct 1006058 CTTTCTGACGGAATGGCGCCGTGTGAGTAAGGCCCCGGAGGCCCTCTTTTTTGTTCAATT 1006117 Query 617 CGAGAAGGGGGACAGCTACTTCCACCTGCACATCCTGGTGGAGACCGTGGGCGTCAAATC 676 || ||||||| | || || ||||| ||| | || |||||||| || || || Sbjct 1006118 TGAAAAGGGGGCAATCTGTTTTCACCTCCACGTGCTTGTGGAGACTACCGGGGTGAAGAG 1006177 Query 677 CATGGTGGTGGGCCGCTACGTGAGCCAGATTAAAGAGAAGCTGGTGACCCGCATCTACCG 736 ||||||| | ||||| | ||||| |||||| || |||||||| | ||| ||||| Sbjct 1006178 CATGGTGCTAGGCCGTTTTGTGAGTCAGATTCGCGATAAGCTGGTTCAGCACATTTACCG 1006237 Query 737 CGGGGTCGAGCCGCAGCTTCCGAACTGGTTCGCGGTGACCAAGACGCGTAATGGCGCCGG 796 |||| ||||| || | ||||||||||||||||| || || | | ||||||||||||| Sbjct 1006238 CGGGATCGAGTCGACCATGCCGAACTGGTTCGCGGTCACAAAAATGTGTAATGGCGCCGG 1006297 Query 797 AGGCGGGAACAAGGTGGTGGACGACTGCTACATCCCCAACTACCTGCTCCCCAAGACCCA 856 ||||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||| Sbjct 1006298 TGGCGGGAACAAGGTGGTGGACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAACCCA 1006357 Query 857 GCCCGAGCTCCAGTGGGCGTGGACTAACATGGACCAGTATATAAGCGCCTGTTTGAATCT 916 || || || ||||||||||||||||||||||| ||||||||||||| |||| ||| || Sbjct 1006358 ACCGGAACTTCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCGTGTTCGAACCT 1006417 Query 917 CGCGGAGCGTAAACGGCTGGTGGCGCAGCATCTGACGCACGTGTCGCAGACGCAGGAGCA 976 ||||||||| |||||||||||||| ||||| |||||||| || ||||| |||||||| Sbjct 1006418 CGCGGAGCGCAAACGGCTGGTGGCTCAGCACCTGACGCATGTCAGTCAGACTCAGGAGCA 1006477 Query 977 GAACAAGGAAAACCAGAACCCCAATTCTGACGCGCCGGTCATCAGGTCAAAAACCTCCGC 1036 |||||| ||||| |||||| |||||||||||||| || ||| |||||||||||||| | Sbjct 1006478 GAACAAAGAAAATTTGAACCCAAATTCTGACGCGCCTGTGATCCGGTCAAAAACCTCCAC 1006537 Query 1037 CAGGTACATGGAGCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATG 1096 | ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 1006538 GCGATACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATG 1006597 Query 1097 GATCCAGGAGGACCAGGCGTCCTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCACA 1156 |||||||||||||||||| |||||||||||||||||||||| || || || ||||| || Sbjct 1006598 GATCCAGGAGGACCAGGCTTCCTACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCA 1006657 Query 1157 AATCAAGGCCGCGCTGGACAATGCCTCCAAAATCATGAGCCTGACAAAGACGGCTCCGGA 1216 || |||||||| ||||||||||||| ||||| |||||||||||||| | ||||||||| Sbjct 1006658 GATTAAGGCCGCTTTGGACAATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGA 1006717 Query 1217 CTACCTGGTGGGCCAGAACCCGCCGGAGGACATT-TCCAGCAACCGCATCTACCGAATCC 1275 ||||||| | || ||| | || |||||||||| ||| |||||||| ||||| || Sbjct 1006718 CTACCTGATTGGACAGCAGCCCGTGGAGGACATTGAGCAG-AACCGCATTTACCGGATTT 1006776 Query 1276 TCGAGATGAACGGGTACGATCCGCAGTACGCGGCCTCCGTCTTCCTGGGCTGGGCGCAAA 1335 | | |||||||| ||||| || ||||| ||||||||||||| ||||||||||| || | Sbjct 1006777 TACAAATGAACGGCTACGACCCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCAGA 1006836 Query 1336 AGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCA 1395 |||| ||||||||| |||| ||||||||||| |||||||| || || ||||| || |||| Sbjct 1006837 AGAAATTCGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCA 1006896 Query 1396 ACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATG 1455 |||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| |||| Sbjct 1006897 ACATTGCGGAAGCCATTGCTCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATG 1006956 Query 1456 AGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGA 1515 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 1006957 AGAACTTTCCGTTCAACGATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGA 1007016 Query 1516 TGACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAGCAAGGTGCGCGTGG 1575 |||| ||||||||||||||| |||||||||||||||||||| |||||||| | || | Sbjct 1007017 TGACCGCCAAGGTCGTAGAGTCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTCG 1007076 Query 1576 ACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGATCGTCACCTCCAACA 1635 |||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||| Sbjct 1007077 ACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACA 1007136 Query 1636 CCAACATGTGCGCGGTCATCGACGGAAACTCGACCACCTTCGAGCACCAACAACCACTCC 1695 |||||||||||| ||| || ||| | ||| |||||||| |||||||| || || | | Sbjct 1007137 CCAACATGTGCGTGGTGATTGACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTAC 1007196 Query 1696 AGGACCGGATGTTCAAGTTCGAGCTCACCAAGCGCCTGGAGCA 1738 ||||||||||||||||||| || |||||| || ||||| || Sbjct 1007197 AGGACCGGATGTTCAAGTTTGAACTCACCCGCCGTCTGGAACA 1007239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15140276585980