Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq2002 1700 0.0 >seq2002 Length=4243662 Score = 1700 bits (1884), Expect = 0.0 Identities = 1373/1660 (83%), Gaps = 25/1660 (2%) Strand=Plus/Plus Query 47 GACCAAAGGTCCGCAGACGGCAGAGCTCTGCTCTGCCGGCCCCANNNNNNNNNNNNNNNN 106 ||||||||||| ||||||| | ||| ||| | ||||||||| Sbjct 1005600 GACCAAAGGTCGCCAGACGGACGCGCTTTGCACATCCGGCCCCACCGAGCGAGCGAGCGC 1005659 Query 107 NNNGAGAGGGAGTGGGCAACTCCATCACTAGGGGTAATCGCGAAGCGCCTCCCACGCTGC 166 |||||||| || ||||||||||||||||||| | |||| | | Sbjct 1005660 GCATAGAGGGAGGGGCCAACTCCATCACTAGGGGTT-TGGCGAGGGGAG----------- 1005707 Query 167 CGCGTCAGCGCTGACGTAAATTACGTCATAGGGG-AGT--GGTCCTGTATTAGCTGTCAC 223 | |||| |||||||| | |||||| |||| || ||||| ||||||| ||||| Sbjct 1005708 -GAGTCA----TGACGTAAGTGACGTCACAGGGTTAGGCAGGTCCGGTATTAGGGGTCAC 1005762 Query 224 GTGAGTGCTTTTGCGACATTTTGCGACACCACGTGGCCATTTAGGGTATATATGGCCGAG 283 |||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct 1005763 GTGAGTGCTTTTGCGACATTTTGCGACACCACGTGGTCAGGCAGGGTATATAAGCCCGAG 1005822 Query 284 TGAGCGAGCAGGATCTCCATTTTGACCGCGAAATTTGAACGAGCAGCAGCCATGCCGGGC 343 ||||| ||| ||||||||| |||||||||| || ||||||||||||||| |||| Sbjct 1005823 TGAGCATGCACAGGCTCCATTTTC-CCGCGAAATTCAAAGGAGCAGCAGCCATGCTGGGC 1005881 Query 344 TTCTACGAGATCGTGATCAAGGTGCCGAGCGACCTGGACGAGCACCTGCCGGGCATTTCT 403 ||||||||||| ||||| ||| | || || |||||||||||||| | ||||| |||||| Sbjct 1005882 TTCTACGAGATTGTGATGAAGATCCCTAGTGACCTGGACGAGCATTTACCGGGTATTTCT 1005941 Query 404 GACTCGTTTGTGAGCTGGGTGGCCGAGAAGGAATGGGAGCTGCCCCCGGATTCTGACATG 463 ||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 1005942 GACAGCTTTGTGAACTGGGTGGCTGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATG 1006001 Query 464 GATCTGAATCTGATTGAGCAGGCACCCCTGACCGTGGCCGAGAAGCTGCAGCGCGACTTC 523 |||| |||||||||||||||| ||||||||||| ||||||| ||||| ||| ||||||| Sbjct 1006002 GATCAGAATCTGATTGAGCAGACACCCCTGACCATGGCCGAAAAGCTACAGTGCGACTTT 1006061 Query 524 CTGGTCCAATGGCGCCGCGTGAGTAAGGCCCCGGAGGCCCTCTTCTTTGTTCAGTTCGAG 583 ||| |||||||||| |||||||||||||||||||||||||| |||||||| || || Sbjct 1006062 CTGACGGAATGGCGCCGTGTGAGTAAGGCCCCGGAGGCCCTCTTTTTTGTTCAATTTGAA 1006121 Query 584 AAGGGCGAGTCCTACTTCCACCTCCATATTCTGGTGGAGACCACGGGGGTCAAATCCATG 643 ||||| | || || |||||||| | || |||||||| || ||||| || |||| Sbjct 1006122 AAGGGGGCAATCTGTTTTCACCTCCACGTGCTTGTGGAGACTACCGGGGTGAAGAGCATG 1006181 Query 644 GTGCTGGGCCGCTTCCTGAGTCAGATTAGGGACAAGCTGGTGCAGACCATCTACCGCGGG 703 ||||| ||||| || ||||||||||| | || |||||||| ||| ||| ||||||||| Sbjct 1006182 GTGCTAGGCCGTTTTGTGAGTCAGATTCGCGATAAGCTGGTTCAGCACATTTACCGCGGG 1006241 Query 704 ATCGAGCCGACCCTGCCCAACTGGTTCGCGGTGACCAAGACGCGTAATGGCGCCGGAGGG 763 |||||| ||||| |||| |||||||||||||| || || | | ||||||||||||| || Sbjct 1006242 ATCGAGTCGACCATGCCGAACTGGTTCGCGGTCACAAAAATGTGTAATGGCGCCGGTGGC 1006301 Query 764 GGGAACAAGGTGGTGGACGAGTGCTACATCCCCAACTACCTCCTGCCCAAGACTCAGCCC 823 |||||||||||||||||||||||||| || ||||||||||| || ||||| || || || Sbjct 1006302 GGGAACAAGGTGGTGGACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAACCCAACCG 1006361 Query 824 GAGCTGCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCCTGTTTGAACCTGGCC 883 || || |||||||||||||||||||||||||||||||||||||| |||| |||||| || Sbjct 1006362 GAACTTCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCGTGTTCGAACCTCGCG 1006421 Query 884 GAGCGCAAACGGCTCGTGGCGCAGCACCTGACCCACGTCAGCCAGACCCAGGAGCAGAAC 943 |||||||||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct 1006422 GAGCGCAAACGGCTGGTGGCTCAGCACCTGACGCATGTCAGTCAGACTCAGGAGCAGAAC 1006481 Query 944 AAGGAGAATCTGAACCCCAATTCTGACGCGCCTGTCATCCGGTCAAAAACCTCCGCGCGC 1003 || || ||| ||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct 1006482 AAAGAAAATTTGAACCCAAATTCTGACGCGCCTGTGATCCGGTCAAAAACCTCCACGCGA 1006541 Query 1004 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATC 1063 ||||||||||||||||||||||| |||||| ||| ||||| || || ||||| |||||| Sbjct 1006542 TACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATC 1006601 Query 1064 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCTTCCAACTCGCGGTCCCAGATC 1123 |||||||||||||| || ||||||||||||||||||| || || || ||||| ||||| Sbjct 1006602 CAGGAGGACCAGGCTTCCTACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCAGATT 1006661 Query 1124 AAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGACTAC 1183 ||||||||| ||||||||||| || || ||| ||||| ||| || || |||||| Sbjct 1006662 AAGGCCGCTTTGGACAATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGACTAC 1006721 Query 1184 CTGGTAGGCC--CCGCTCCGCCCGCGGACATTAAAACCAACCGCATCTACCGCATCCTGG 1241 ||| | || | | || ||| | ||||||| | |||||||| ||||| || | Sbjct 1006722 CTGATTGGACAGCAGC-CCG-TGGAGGACATTGAGCAGAACCGCATTTACCGGATTTTAC 1006779 Query 1242 AGCTGAACGGCTACGAACCTGCCTACGCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAA 1301 | ||||||||||||| || | ||| | | |||||||||||| |||||||| ||||| | Sbjct 1006780 AAATGAACGGCTACGACCCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCAGAAGA 1006839 Query 1302 GGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCACCACGGGCAAGACCAACA 1361 ||||||||||| || |||||||||||||||||||| || ||||||||||||||||||| Sbjct 1006840 AATTCGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACA 1006899 Query 1362 TCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGA 1421 | ||||||||||| || ||||| |||||||| ||||||||||| |||||||| ||||||| Sbjct 1006900 TTGCGGAAGCCATTGCTCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGA 1006959 Query 1422 ACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGA 1481 ||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 1006960 ACTTTCCGTTCAACGATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGA 1007019 Query 1482 CGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACC 1541 | ||||||||||| ||||| ||||||||||| || |||||||||||||| | || |||| Sbjct 1007020 CCGCCAAGGTCGTAGAGTCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTCGACC 1007079 Query 1542 AAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCA 1601 ||||||||||||| || ||||||||||||||||| ||||| ||||| || |||||||||| Sbjct 1007080 AAAAGTGCAAGTCATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCA 1007139 Query 1602 ACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGG 1661 ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||| Sbjct 1007140 ACATGTGCGTGGTGATTGACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTACAGG 1007199 Query 1662 ACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCA 1701 ||||||||||||| ||||||||||||||||||||||| || Sbjct 1007200 ACCGGATGTTCAAGTTTGAACTCACCCGCCGTCTGGAACA 1007239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14983498573995