Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_005889.1 Length=4693 Score E Sequences producing significant alignments: (Bits) Value seq2002 455 1e-124 >seq2002 Length=4243662 Score = 455 bits (504), Expect = 1e-124 Identities = 905/1326 (68%), Gaps = 48/1326 (4%) Strand=Plus/Plus Query 411 TGGAAGAGCACCTGCCTGGAATTTCTGACAACTTTGTAGACTGGGTAACTGGTCAAATTT 470 |||| ||||| | || || |||||||||| |||||| ||||||| ||| | | Sbjct 1005916 TGGACGAGCATTTACCGGGTATTTCTGACAGCTTTGTGAACTGGGTGGCTGAGAAGGAAT 1005975 Query 471 GGGAGCTGCCTCCCGAGTCAGATTTGAATTTGACTCTGATTGAGCAGCCTCAGCTGACGG 530 ||||| |||| || || || || || || || ||||||||||||| | | ||||| Sbjct 1005976 GGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAGACACCCCTGACCA 1006035 Query 531 TGGCTGACAGAATTCGCCGCGTGTTCCTGTACGAGTGGAACAAATTTTCCAAG---CAGG 587 |||| || | | | ||| || ||| || ||| | | ||| | || Sbjct 1006036 TGGCCGAAAAGCTACAGTGCGACTTTCTGACGGAATGGCGCCGTGTGAGTAAGGCCCCGG 1006095 Query 588 AGAGCAAATTCTTTGTGCAGTTTGAAAAGGG----ATCTGAATATTTTCATCTGCACACG 643 || | || ||||| || ||||||||||| ||||| |||||| || ||| | Sbjct 1006096 AGGCCCTCTTTTTTGTTCAATTTGAAAAGGGGGCAATCTG----TTTTCACCTCCACGTG 1006151 Query 644 CTCGTGGAGACCTCCGGCATCTCTTCTATGGTCCTTGGCCGCTACGTGAGTCAGATTCGC 703 || |||||||| |||| | ||||| || ||||| | ||||||||||||||| Sbjct 1006152 CTTGTGGAGACTACCGGGGTGAAGAGCATGGTGCTAGGCCGTTTTGTGAGTCAGATTCGC 1006211 Query 704 GCCCAGCTGGTGAAGGTGGTGTTCCAGAACATTGAGCCGCGGATTAACGACTGGGTCGCC 763 | ||||||| || | | || || ||| || || ||||| |||| Sbjct 1006212 GATAAGCTGGTTCAGCACATTTACCGCGGGATCGAGTCGACCATGCCGAACTGGTTCGCG 1006271 Query 764 ATCACCAAG----GTAAAGAAG--GGCGGAGCCAATAAGGTGGTGGATTCTGGGTATATT 817 |||| || |||| | | || || | || ||||||||||| | |||||| Sbjct 1006272 GTCACAAAAATGTGTAATGGCGCCGGTGGCGGGAACAAGGTGGTGGACGAGTGCTATATT 1006331 Query 818 CCCGCCTACCTGCTGCCGAAGGTCCAACCAGAGCTTCAGTGGGCGTGGACTAACCTCGAA 877 ||| ||||||||| || || |||||| || ||||||||||||||||||||| | || Sbjct 1006332 CCCAACTACCTGCTCCCCAAAACCCAACCGGAACTTCAGTGGGCGTGGACTAACATGGAG 1006391 Query 878 GAGTATAAATTGGCCGCCCTC-AATCTGGAGGAGCGCAAACGGCTCGTCGCTCAGTTTCA 936 ||||||| | || | || || || | ||||||||||||||| || |||||| | Sbjct 1006392 GAGTATATAAGCGC-GTGTTCGAACCTCGCGGAGCGCAAACGGCTGGTGGCTCAGCACCT 1006450 Query 937 G---CTTG--AGTC---CTC-GCAGCGCTCGCAAGAGGCATCTT--CCCAGAGG--GACG 983 | | || |||| ||| | ||| |||| || | |||| | |||| Sbjct 1006451 GACGCATGTCAGTCAGACTCAGGAGCAGAACAAAGAAA-ATTTGAACCCAAATTCTGACG 1006509 Query 984 TTTCGGCTGACCCGGTCATCAAGAGCAAGACTTCCCAGAAATACATGGCGCTGGTAAGCT 1043 | | ||| ||||||| || || ||| | |||||||| |||||| | | Sbjct 1006510 CGCCTG-TGATCCGGTCA--------AAAACCTCCACGCGATACATGGAGCTGGTCGGGT 1006560 Query 1044 GGCTGGTGGAACATGGCATCACTTCCGAGAAGCAGTGGATTCAGGAGAATCAGGAGAGCT 1103 |||| ||||| | || ||||| || || ||||| ||||| |||||| | |||| || Sbjct 1006561 GGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGGCTTCCT 1006620 Query 1104 ACCTGTCCTTCAACTCCACGGGAAACTCTCGGAGCCAGATTAAAGCCGCGCTTGACAACG 1163 || | ||||||||| || | ||| || ||| |||||||| ||||| | ||||| | Sbjct 1006621 ACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCAGATTAAGGCCGCTTTGGACAATG 1006680 Query 1164 CGTCAAAAATTATGAGTCTGACCAAATCTGCCTCAGACTATCTCGTGGGACAGACTGTTC 1223 | || ||||||||||| ||||| ||| || | ||||| || | |||||| | | | Sbjct 1006681 CCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGACTACCTGATTGGACAG-CAGCCC 1006739 Query 1224 CAG-AGGACATTTCTGAAAACAGAATCTGGCAGATTTTTGATCTCAACGGCTACGACCCG 1282 | |||||||| | ||| | || | | |||||| | | |||||||||||||| Sbjct 1006740 GTGGAGGACATTGAGCAGAACCGCATTTACCGGATTTTACAAATGAACGGCTACGACCCC 1006799 Query 1283 GCATACGCGGGCTCTGT-TCTCTACGGCTGGTGCACTCGCGCCTTT-GGAAAGAGGAACA 1340 | ||| ||| ||| || | ||| |||||| || | | || || ||| |||| | Sbjct 1006800 GAGTACACGGCCTCCGTCTTTCTG-GGCTGG-GCTCAGAAGAAATTCGGGAAGCGGAATA 1006857 Query 1341 CCGTCTGGCTGTATGGACCCGCGACCACCGGAAAGACCAACATCGCGGAAGCCATCTCTC 1400 || ||||||||| ||| || || ||||| || ||||||||||| ||||||||||| ||| Sbjct 1006858 CCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCATTGCTC 1006917 Query 1401 ACACCGTGCCCTTTTATGGCTGTGTGAACTGGACTAATGAGAACTTNNNNNNNNNNNNNN 1460 || | ||||||||||| ||||| ||||||||||||||||||||||| Sbjct 1006918 ACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCCGTTCAACGATT 1006977 Query 1461 NNNNNGAAAAAATGTTGATCTGGTGGGAGGAGGGAAAGATGACCAGCAAGGTGGTGGAAC 1520 || |||||| ||||||||||||||||||| ||||||||| |||||| || || Sbjct 1006978 GCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTAGAGT 1007037 Query 1521 CCGCCAAGGCCATCTTgggggggTCTAGAGTACGAGTGGATCAAAAATGTAAATCCTCTG 1580 | |||||||||||| |||| || | |||| || || ||||| || || || || | Sbjct 1007038 CAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTCGACCAAAAGTGCAAGTCATCGG 1007097 Query 1581 TACAAGTAGACTCTACCCCGGTGATTATCACCTCCAATACTAACATGTGTGTGGTGGTGG 1640 || | ||| | || || || || | || ||||| || |||||||| |||||| | | Sbjct 1007098 CCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCAACATGTGCGTGGTGATTG 1007157 Query 1641 ATGGGAACTCCACGACCTTTGAACACCAGCAGCCGCTGGAAGACCGCATGTTCAGATTTG 1700 | ||||| ||| |||||||| |||||||||||| | | ||||| ||||||| |||| Sbjct 1007158 ACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTACAGGACCGGATGTTCAAGTTTG 1007217 Query 1701 AACTCA 1706 |||||| Sbjct 1007218 AACTCA 1007223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14903509792370