Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq2002 506 6e-140 >seq2002 Length=4243662 Score = 506 bits (560), Expect = 6e-140 Identities = 919/1333 (69%), Gaps = 50/1333 (4%) Strand=Plus/Plus Query 397 TGACGTGGAGGAACATCTGCCTGGAATTTCTGACAGCTTTGTGGACTGGGTAACTGGTCA 456 |||| |||| || ||| | || || |||||||||||||||||| ||||||| ||| | Sbjct 1005911 TGACCTGGACGAGCATTTACCGGGTATTTCTGACAGCTTTGTGAACTGGGTGGCTGAGAA 1005970 Query 457 AATTTGGGAGCTGCCTCCAGAGTCAGATTTAAATTTGACTCTGGTTGAACAGCCTCAGTT 516 |||||| |||| || || || || | || || |||| |||| ||| | | | Sbjct 1005971 GGAATGGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAGACACCCCT 1006030 Query 517 GACGGTGGCTGATAGAATTCGCCGCGTGTTCCTGTACGAGTGGAACAAATTTTCCAAG-- 574 ||| |||| || | | | ||| || ||| || ||| | | ||| Sbjct 1006031 GACCATGGCCGAAAAGCTACAGTGCGACTTTCTGACGGAATGGCGCCGTGTGAGTAAGGC 1006090 Query 575 -CAGGAGTCCAAATTCTTTGTGCAGTTTGAAAAGGG----ATCTGAATATTTTCATCTGC 629 | |||| || || ||||| || ||||||||||| ||||| |||||| || | Sbjct 1006091 CCCGGAGGCCCTCTTTTTTGTTCAATTTGAAAAGGGGGCAATCTG----TTTTCACCTCC 1006146 Query 630 ACACGCTTGTGGAGACCTCCGGCATCTCTTCCATGGTCCTCGGCCGCTACGTGAGTCAGA 689 || |||||||||||| |||| | |||||| || ||||| | |||||||||| Sbjct 1006147 ACGTGCTTGTGGAGACTACCGGGGTGAAGAGCATGGTGCTAGGCCGTTTTGTGAGTCAGA 1006206 Query 690 TTCGCGCCCAGCTGGTGAAAGTGGTCTTCCAGGGAATTGAACC--CCAGATCAACGACTG 747 |||||| ||||||| | | | || || || || | ||| | | |||| Sbjct 1006207 TTCGCGATAAGCTGGTTCAGCACATTTACCGCGGGATCGAGTCGACCATGCCGA--ACTG 1006264 Query 748 GGTCGCCATCACCAAG----GTAAAGAAG--GGCGGAGCCAATAAGGTGGTGGATTCTGG 801 | |||| |||| || |||| | | || || | || ||||||||||| | Sbjct 1006265 GTTCGCGGTCACAAAAATGTGTAATGGCGCCGGTGGCGGGAACAAGGTGGTGGACGAGTG 1006324 Query 802 GTATATTCCCGCCTACCTGCTGCCGAAGGTCCAACCGGAGCTTCAGTGGGCGTGGACAAA 861 ||||||||| ||||||||| || || ||||||||| ||||||||||||||||| || Sbjct 1006325 CTATATTCCCAACTACCTGCTCCCCAAAACCCAACCGGAACTTCAGTGGGCGTGGACTAA 1006384 Query 862 CCTGGACGAGTATAAATTGGCCGCCCTGAATCTGGAGGAGCGCAAACGGCTCGTCGCGCA 921 | |||| ||||||| | || ||| || | ||||||||||||||| || || || Sbjct 1006385 CATGGAGGAGTATATAAGCGCGTGTTCGAACCTCGCGGAGCGCAAACGGCTGGTGGCTCA 1006444 Query 922 GTTTCTGGCAGAATCCTCGCAGCGCTC----GCAGGAGGCGGC---TTCGCAGCGTGAGT 974 | ||| | | | ||| ||| |||| | | || | | | | | Sbjct 1006445 GCACCTGACGCATGTCAGTCAGA-CTCAGGAGCAGAACAAAGAAAATTTGAACCCAAA-T 1006502 Query 975 TCT----CGGCTG--ACCCGGTCATCAAAAGCAAGACTTCCCAGAAATACATGGCGCTCG 1028 ||| || ||| | ||||||| || || ||| | |||||||| ||| | Sbjct 1006503 TCTGACGCGCCTGTGATCCGGTCA--------AAAACCTCCACGCGATACATGGAGCTGG 1006554 Query 1029 TCAACTGGCTCGTGGAGCACGGCATCACTTCCGAGAAGCAGTGGATCCAGGAAAATCAGG 1088 || ||||||||||| | || ||||| || || ||||| ||||||||||| | |||| Sbjct 1006555 TCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGG 1006614 Query 1089 AGAGCTACCTCTCCTTCAACTCCACCGGCAACTCTCGGAGCCAGATCAAGGCCGCGCTCG 1148 |||| ||||||||||| || || || ||| ||||| |||||||| | | Sbjct 1006615 CTTCCTACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCAGATTAAGGCCGCTTTGG 1006674 Query 1149 ACAACGCGACCAAAATTATGAGTCTGACAAAAAGCGCGGTGGACTACCTCGTGGGG-AGC 1207 |||| || | ||||||||||| |||||||||| || ||||||||| | || ||| Sbjct 1006675 ACAATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGACTACCTGATTGGACAGC 1006734 Query 1208 T--CCGTTCCCGAGGACATTTCAAAAAACAGAATCTGGCAAATTTTTGAGATGAATGGCT 1265 |||| ||||||||| | ||| | || | | ||||| | ||||| |||| Sbjct 1006735 AGCCCGTG---GAGGACATTGAGCAGAACCGCATTTACCGGATTTTACAAATGAACGGCT 1006791 Query 1266 ACGACCCGGCCTACGCGGGATCCATCCTCTACGGCTGGTGTCAGCGCTCCTTCAACAAGA 1325 ||||||| | ||| ||| ||| || | |||||| |||| ||| ||| Sbjct 1006792 ACGACCCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCAGAAGAAATTCGGGAAGC 1006851 Query 1326 GGAACACCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACATCGCGGAGGCCA 1385 |||| ||| ||||||| | || || || || || |||||||||||||| ||||| |||| Sbjct 1006852 GGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCA 1006911 Query 1386 TCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAACTTTCCCTTTA 1445 | || ||| | ||||||||||||||||||||||||||||| ||||| |||||||| || | Sbjct 1006912 TTGCTCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCCGTTCA 1006971 Query 1446 ATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGACCAACAAGGTGG 1505 | || || | ||||||||| | || |||||||||||||| ||||||||| |||||| | Sbjct 1006972 ACGATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCG 1007031 Query 1506 TTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAGGTGCGGGTCGATCAGAAATGTAAAT 1565 | || || ||||||||||||||||| ||| ||||| | ||||| || || || || | Sbjct 1007032 TAGAGTCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTCGACCAAAAGTGCAAGT 1007091 Query 1566 CCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAACTTCCAATACAAACATGTGTGTGG 1625 | || | || || || | || || ||||| || || ||||| || |||||||| |||| Sbjct 1007092 CATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCAACATGTGCGTGG 1007151 Query 1626 TGGTGGATGGGAATTCCACGACCTTTGAACACCAGCAGCCGCTGGAGGACCGCATGTTCA 1685 || | || |||| ||| |||||||| |||||||||||| | ||||||| ||||||| Sbjct 1007152 TGATTGACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTACAGGACCGGATGTTCA 1007211 Query 1686 AATTTGAACTGAC 1698 | |||||||| || Sbjct 1007212 AGTTTGAACTCAC 1007224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14740332677855