Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq2002 1709 0.0 >seq2002 Length=4243662 Score = 1709 bits (1894), Expect = 0.0 Identities = 1373/1660 (83%), Gaps = 26/1660 (2%) Strand=Plus/Plus Query 47 GACCAAAGGTCCGCAGACGGCAGAGCTCTGCTCTGCCGGCCCCANNNNNNNNNNNNNNNN 106 ||||||||||| ||||||| | ||| ||| | ||||||||| Sbjct 1005600 GACCAAAGGTCGCCAGACGGACGCGCTTTGCACATCCGGCCCCACCGAGCGAGCGAGCGC 1005659 Query 107 NNATAGAGGGAGTGGCCAACTCCATCACTAGGGGTACCGCGAAGCGCCTCCCACGCTGCC 166 |||||||||| |||||||||||||||||||||| |||| | | Sbjct 1005660 GCATAGAGGGAGGGGCCAACTCCATCACTAGGGGTTTGGCGAGGGGAG------------ 1005707 Query 167 GCGTCAGCGCTGACGTAAATCACGTCATAGGGG-AGT--GGTCCTGTATTAGCTGTCACG 223 | |||| |||||||| | |||||| |||| || ||||| ||||||| |||||| Sbjct 1005708 GAGTCA----TGACGTAAGTGACGTCACAGGGTTAGGCAGGTCCGGTATTAGGGGTCACG 1005763 Query 224 TGAGTGCTTTTGCGACATTTTGCGACACCACGTGGCCATTTGAGGTATATATGGCCGAGT 283 ||||||||||||||||||||||||||||||||||| || |||||||| | |||||| Sbjct 1005764 TGAGTGCTTTTGCGACATTTTGCGACACCACGTGGTCAGGCAGGGTATATAAGCCCGAGT 1005823 Query 284 GAGCGAGCAGGATCTCCATTTTGACCGCGAAATTTGAACGAGCAGCAGCCATGCCGGGTT 343 |||| ||| ||||||||| |||||||||| || ||||||||||||||| ||| | Sbjct 1005824 GAGCATGCACAGGCTCCATTTTC-CCGCGAAATTCAAAGGAGCAGCAGCCATGCTGGGCT 1005882 Query 344 TCTACGAGATCGTGATCAAGGTGCCGAGCGACCTGGACGAGCACCTGCCGGGCATTTCTG 403 |||||||||| ||||| ||| | || || |||||||||||||| | ||||| ||||||| Sbjct 1005883 TCTACGAGATTGTGATGAAGATCCCTAGTGACCTGGACGAGCATTTACCGGGTATTTCTG 1005942 Query 404 ACTCGTTTGTGAACTGGGTGGCCGAGAAGGAATGGGAGCTGCCCCCGGATTCTGACATGG 463 || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1005943 ACAGCTTTGTGAACTGGGTGGCTGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGG 1006002 Query 464 ATCTGAATCTGATCGAGCAGGCACCCCTGACCGTGGCCGAGAAGCTGCAGCGCGACTTCC 523 ||| ||||||||| |||||| ||||||||||| ||||||| ||||| ||| ||||||| | Sbjct 1006003 ATCAGAATCTGATTGAGCAGACACCCCTGACCATGGCCGAAAAGCTACAGTGCGACTTTC 1006062 Query 524 TGGTCCAATGGCGCCGCGTGAGTAAGGCCCCGGAGGCCCTGTTCTTTGTTCAGTTCGAGA 583 || |||||||||| ||||||||||||||||||||||| || |||||||| || || | Sbjct 1006063 TGACGGAATGGCGCCGTGTGAGTAAGGCCCCGGAGGCCCTCTTTTTTGTTCAATTTGAAA 1006122 Query 584 AGGGCGAGAGCTACTTCCACCTTCACGTTCTGGTGGAGACCACGGGGGTCAAGTCCATGG 643 |||| | | || || ||||| ||||| || |||||||| || ||||| ||| ||||| Sbjct 1006123 AGGGGGCAATCTGTTTTCACCTCCACGTGCTTGTGGAGACTACCGGGGTGAAGAGCATGG 1006182 Query 644 TGCTAGGCCGCTTCCTGAGTCAGATTCGGGAGAAGCTGGTCCAGACCATCTACCGCGGGG 703 |||||||||| || ||||||||||||| || |||||||| ||| ||| ||||||||| Sbjct 1006183 TGCTAGGCCGTTTTGTGAGTCAGATTCGCGATAAGCTGGTTCAGCACATTTACCGCGGGA 1006242 Query 704 TCGAGCCCACGCTGCCCAACTGGTTCGCGGTGACCAAGACGCGTAATGGCGCCGGCGGGG 763 ||||| | || |||| |||||||||||||| || || | | ||||||||||||| || | Sbjct 1006243 TCGAGTCGACCATGCCGAACTGGTTCGCGGTCACAAAAATGTGTAATGGCGCCGGTGGCG 1006302 Query 764 GGAACAAGGTGGTGGACGAGTGCTACATCCCCAACTACCTCCTGCCCAAGACCCAGCCCG 823 ||||||||||||||||||||||||| || ||||||||||| || ||||| ||||| || | Sbjct 1006303 GGAACAAGGTGGTGGACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAACCCAACCGG 1006362 Query 824 AGCTGCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCGTGTTTGAACCTGGCCG 883 | || ||||||||||||||||||||||||||||||||||||||||||| |||||| || | Sbjct 1006363 AACTTCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCGTGTTCGAACCTCGCGG 1006422 Query 884 AACGCAAACGGCTCGTGGCGCAGCACCTGACCCACGTCAGCCAGACGCAGGAGCAGAACA 943 | ||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||||| Sbjct 1006423 AGCGCAAACGGCTGGTGGCTCAGCACCTGACGCATGTCAGTCAGACTCAGGAGCAGAACA 1006482 Query 944 AGGAGAATCTGAACCCCAATTCTGACGCGCCCGTGATCAGGTCAAAAACCTCCGCGCGCT 1003 | || ||| ||||||| |||||||||||||| |||||| |||||||||||||| |||| | Sbjct 1006483 AAGAAAATTTGAACCCAAATTCTGACGCGCCTGTGATCCGGTCAAAAACCTCCACGCGAT 1006542 Query 1004 ACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATCC 1063 |||||||||||||||||||||| |||||| ||| ||||| || || ||||| ||||||| Sbjct 1006543 ACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATCC 1006602 Query 1064 AGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCAGATCA 1123 ||||||||||||| || ||||||||||||||||||| || || || ||||| ||||| | Sbjct 1006603 AGGAGGACCAGGCTTCCTACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCAGATTA 1006662 Query 1124 AGGCCGCGCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGACTACC 1183 ||||||| ||||||||||| || || ||| ||||| ||| || || ||||||| Sbjct 1006663 AGGCCGCTTTGGACAATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGACTACC 1006722 Query 1184 TGGTGGGGCCCTCGCTGCCC---GCGGACATTAAAACCAACCGCATCTACCGCATCCTGG 1240 || | || | || |||| | ||||||| | |||||||| ||||| || | Sbjct 1006723 TGATTGGAC---AGCAGCCCGTGGAGGACATTGAGCAGAACCGCATTTACCGGATTTTAC 1006779 Query 1241 AGCTGAACGGGTACGATCCTGCCTACGCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAA 1300 | ||||||| ||||| || | ||| | | |||||||||||| |||||||| ||||| | Sbjct 1006780 AAATGAACGGCTACGACCCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCAGAAGA 1006839 Query 1301 AGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACA 1360 | ||||||||||| || |||||||||||||||||||| || ||||| ||||||||||||| Sbjct 1006840 AATTCGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACA 1006899 Query 1361 TTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGA 1420 ||||||||||||| || ||||| |||||||| ||||||||||| |||||||| ||||||| Sbjct 1006900 TTGCGGAAGCCATTGCTCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGA 1006959 Query 1421 ACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGA 1480 ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 1006960 ACTTTCCGTTCAACGATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGA 1007019 Query 1481 CGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACC 1540 | ||||||||||| ||||| ||||||||||| || |||||||||||||| | || |||| Sbjct 1007020 CCGCCAAGGTCGTAGAGTCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTCGACC 1007079 Query 1541 AAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCA 1600 ||||||||||||| || ||||||||||||||||| ||||| ||||| || |||||||||| Sbjct 1007080 AAAAGTGCAAGTCATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCA 1007139 Query 1601 ACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGG 1660 ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||| Sbjct 1007140 ACATGTGCGTGGTGATTGACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTACAGG 1007199 Query 1661 ACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCA 1700 ||||||||||||| ||||||||||||||||||||||| || Sbjct 1007200 ACCGGATGTTCAAGTTTGAACTCACCCGCCGTCTGGAACA 1007239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14993097227790