Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_006261.1 Length=4393 Score E Sequences producing significant alignments: (Bits) Value seq2002 1653 0.0 >seq2002 Length=4243662 Score = 1653 bits (1832), Expect = 0.0 Identities = 1336/1605 (83%), Gaps = 32/1605 (2%) Strand=Plus/Plus Query 1 CAGAGAGGGAGTGGCCAACTCCATCACTAGGGGTAGCGCGAAGCGCCTCCCACGCTGCCG 60 || |||||||| |||||||||||||||||||||| |||| | | | Sbjct 1005661 CATAGAGGGAGGGGCCAACTCCATCACTAGGGGTTTGGCGAGGGGAG------------G 1005708 Query 61 CGTCAGCGCTGACGTAAATTACGTCATAGGGG-AGT--GGTCCTGTATTAGCTGTCACGT 117 |||| |||||||| | |||||| |||| || ||||| ||||||| ||||||| Sbjct 1005709 AGTCA----TGACGTAAGTGACGTCACAGGGTTAGGCAGGTCCGGTATTAGGGGTCACGT 1005764 Query 118 GAGTGCTTTTGCGGCATTTTGCGACACCACGTGGCCATTTGAGGTATATATGGCCGAGTG 177 ||||||||||||| |||||||||||||||||||| || |||||||| | ||||||| Sbjct 1005765 GAGTGCTTTTGCGACATTTTGCGACACCACGTGGTCAGGCAGGGTATATAAGCCCGAGTG 1005824 Query 178 AGCGAGCAGGATCTCCATTTTGACCGCGAAATTTGAACGAGCAGCAGCCATGCCGGGCTT 237 ||| ||| ||||||||| |||||||||| || ||||||||||||||| |||||| Sbjct 1005825 AGCATGCACAGGCTCCATTTTC-CCGCGAAATTCAAAGGAGCAGCAGCCATGCTGGGCTT 1005883 Query 238 CTACGAGATCGTGATCAAGGTGCCGAGCGACCTGGACGAGCACCTGCCGGGCATTTCTGA 297 ||||||||| ||||| ||| | || || |||||||||||||| | ||||| |||||||| Sbjct 1005884 CTACGAGATTGTGATGAAGATCCCTAGTGACCTGGACGAGCATTTACCGGGTATTTCTGA 1005943 Query 298 CTCGTTTGTGAACTGGGTGGCCGAGAAGGAATGGGAGCTGCCCCCGGATTCTGACATGGA 357 | ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 1005944 CAGCTTTGTGAACTGGGTGGCTGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGGA 1006003 Query 358 TCGGAATCTGATCGAGCAGGCACCCCTGACCGTGGCCGAGAAGCTGCAGCGCGACTTCCT 417 || ||||||||| |||||| ||||||||||| ||||||| ||||| ||| ||||||| || Sbjct 1006004 TCAGAATCTGATTGAGCAGACACCCCTGACCATGGCCGAAAAGCTACAGTGCGACTTTCT 1006063 Query 418 GGTCCAATGGCGCCGCGTGAGTAAGGCCCCGGAGGCCCTCTTCTTTGTTCAGTTCGAGAA 477 | |||||||||| |||||||||||||||||||||||||| |||||||| || || || Sbjct 1006064 GACGGAATGGCGCCGTGTGAGTAAGGCCCCGGAGGCCCTCTTTTTTGTTCAATTTGAAAA 1006123 Query 478 GGGCGAGAGCTACTTTCACCTGCACGTTCTGGTCGAGACCACGGGGGTCAAGTCCATGGT 537 ||| | | || |||||||| ||||| || || ||||| || ||||| ||| |||||| Sbjct 1006124 GGGGGCAATCTGTTTTCACCTCCACGTGCTTGTGGAGACTACCGGGGTGAAGAGCATGGT 1006183 Query 538 GCTAGGCCGCTTCCTGAGTCAGATTCGGGAAAAGCTTGGTCCAGACCATCTACCCGCGGG 597 ||||||||| || ||||||||||||| || ||||| ||| ||| ||| |||| ||||| Sbjct 1006184 GCTAGGCCGTTTTGTGAGTCAGATTCGCGATAAGCT-GGTTCAGCACATTTACC-GCGGG 1006241 Query 598 GTCGAGCCCCACCTTGCCCAACTGGTTCGCGGTGACCAAAGACGCGGTAATGGCGCCGGC 657 ||||| | ||| |||| |||||||||||||| || ||| | | | |||||||||||| Sbjct 1006242 ATCGAGTCG-ACCATGCCGAACTGGTTCGCGGTCACAAAA-ATGTG-TAATGGCGCCGGT 1006298 Query 658 gggggggAACAAGGTGGTGGACGAGTGCTACATCCCCAACTACCTCCTGCCCAAGACTCA 717 || ||| ||||||||||||||||||||||| || ||||||||||| || ||||| || || Sbjct 1006299 GGCGGG-AACAAGGTGGTGGACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAACCCA 1006357 Query 718 GCCCGAGCTGCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCGTGCTTGAACCT 777 || || || ||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 1006358 ACCGGAACTTCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCGTGTTCGAACCT 1006417 Query 778 GGCCGAGCGCAAACGGCTCGTGGCGCAGCACCTGACCCACGTCAGCCAGACGCAGGAGCA 837 || |||||||||||||| ||||| ||||||||||| || ||||| ||||| |||||||| Sbjct 1006418 CGCGGAGCGCAAACGGCTGGTGGCTCAGCACCTGACGCATGTCAGTCAGACTCAGGAGCA 1006477 Query 838 GAACAAGGAGAATCTGAACCCCAATTCTGACGCGCCCGTGATCAGGTCAAAAACCTCCGC 897 |||||| || ||| ||||||| |||||||||||||| |||||| |||||||||||||| | Sbjct 1006478 GAACAAAGAAAATTTGAACCCAAATTCTGACGCGCCTGTGATCCGGTCAAAAACCTCCAC 1006537 Query 898 GCGCTATATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTG 957 ||| || |||||||||||||||||||| |||||| ||| ||||| || || ||||| || Sbjct 1006538 GCGATACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATG 1006597 Query 958 GATCCAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCA 1017 |||||||||||||||||| || ||||||||||||||||||| || || || ||||| || Sbjct 1006598 GATCCAGGAGGACCAGGCTTCCTACATCTCCTTCAACGCCGTGTCAAATTCCCGGTCTCA 1006657 Query 1018 GATCAAGGCCGCGCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGA 1077 ||| |||||||| ||||||||||| || || ||| ||||| ||| || || || Sbjct 1006658 GATTAAGGCCGCTTTGGACAATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGGA 1006717 Query 1078 CTACCTGGTGGGGCCCTCGCTGCCCGCGGA---CATTACCCAGAACCGCATCTACCGCAT 1134 ||||||| | || | || ||||| ||| |||| ||||||||||| ||||| || Sbjct 1006718 CTACCTGATTGGACA---GCAGCCCGTGGAGGACATTGAGCAGAACCGCATTTACCGGAT 1006774 Query 1135 CCTCGCTCTCAACGGCTACGACCCTGCCTACGCCGGCTCCGTCTTTCTCGGCTGGGCTCA 1194 | | |||||||||||||| | ||| | | |||||||||||| ||||||||||| Sbjct 1006775 TTTACAAATGAACGGCTACGACCCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCA 1006834 Query 1195 GAAAAAGTTCGGGAAACGCAACACCATCTGGCTGTTTGGACCCGCCACCACCGGCAAGAC 1254 ||| || |||||||| || || ||||||||||||||||| || || ||||| |||||||| Sbjct 1006835 GAAGAAATTCGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGAC 1006894 Query 1255 CAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAA 1314 |||||||||||||||||| || ||||| |||||||| ||||||||||| |||||||| || Sbjct 1006895 CAACATTGCGGAAGCCATTGCTCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAA 1006954 Query 1315 TGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAA 1374 |||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||| Sbjct 1006955 TGAGAACTTTCCGTTCAACGATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAA 1007014 Query 1375 GATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGTGCGCGT 1434 |||||| ||||||||||| ||||| ||||||||||| || |||||||||||||| | || Sbjct 1007015 GATGACCGCCAAGGTCGTAGAGTCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGT 1007074 Query 1435 GGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAA 1494 ||||||||||||||||| || ||||||||||||||||| ||||| ||||| || ||||| Sbjct 1007075 CGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAA 1007134 Query 1495 CACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCTCT 1554 |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| | Sbjct 1007135 CACCAACATGTGCGTGGTGATTGACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTT 1007194 Query 1555 CCAGGACCGGATGTTTAAGTTCGAACTCACCCGCCGTCTGGAGCA 1599 |||||||||||||| ||||| |||||||||||||||||||| || Sbjct 1007195 ACAGGACCGGATGTTCAAGTTTGAACTCACCCGCCGTCTGGAACA 1007239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13943644412870