Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq2002 329 1e-86 >seq2002 Length=4243662 Score = 329 bits (364), Expect = 1e-86 Identities = 644/943 (68%), Gaps = 29/943 (3%) Strand=Plus/Plus Query 663 CGGGGGCGCGAACAAGGTCCGGGCCGAGTCGTATATTCCCGCCTACCTGATTCCGAAACA 722 ||| |||| ||||||||| || ||||| ||||||||| ||||||| | || ||| Sbjct 1006295 CGGTGGCGGGAACAAGGTGGTGGACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAAC 1006354 Query 723 GCAACCGGAAGTGCAGTGGGCGTGGACTAACGTGCCCGAGTATATAAAAGCGTGCCTGCA 782 ||||||||| | |||||||||||||||||| || |||||||||| ||||| | | Sbjct 1006355 CCAACCGGAACTTCAGTGGGCGTGGACTAACATGGAGGAGTATATAAGCGCGTGTTCGAA 1006414 Query 783 CCGAGAACTGCGTGCCA--GTCTCGCGCGACTTCACTTCGAGGAGGCGGGGCT--CTC-- 836 || | | | | || | | || | | | ||| | | | | | | ||| Sbjct 1006415 CCTCG--CGGAGCGCAAACGGCTGGTGGCTCAGCACCTGACGCATGTCAGTCAGACTCAG 1006472 Query 837 --GCAATCCAAGGAAAATCTCGCGAGAACTGCAGACGGCGCTCCCGTGATCGCGACCCGC 894 ||| ||| |||||| | || | | |||| | || |||||| | | Sbjct 1006473 GAGCAGAACAAAGAAAATTTGAACCCAAATTCTGACG---CGCCTGTGATCCGGTCAAAA 1006529 Query 895 GTCAGCAAACGCTACATGGAGCTCGTGGATTGGCTCGTGGAGAAGGGGATCACCACCGAG 954 | || || ||||||||||| || | ||||||||||| ||||||||||| | || Sbjct 1006530 ACCTCCACGCGATACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAA 1006589 Query 955 AAGGAATGGCTGCTGGAAAACAGAGAAAGCTTTCGGAG----CTTCCAGGCCTCGAGCAA 1010 ||| ||||| | | ||| || | |||| | |||| | ||| | || Sbjct 1006590 AAGCAATGGATCCAGGAGGACC----AGGCTTCCTACATCTCCTTCAACGCCGTGTCAAA 1006645 Query 1011 CTCGGCGCGTCAGATCAAGACGGCCCTGCAAGGCGCCATCCAGGAG-ATGCTTCTGACCA 1069 || | |||||| ||| | || || | ||| || | | ||| ||||| | Sbjct 1006646 TTCCCGGTCTCAGATTAAGGCCGCTTTGGACAATGCC-TCTAAAATTATGAGCCTGACAA 1006704 Query 1070 AGACGGCGGAGGACTACCTCGTCGGAAAAGAACCCGTCTCGGACGACGAGATTCGTCAGA 1129 | | ||| ||||||||| | ||| | | ||||| ||| ||| ||| |||| Sbjct 1006705 AAATGGCTCCGGACTACCTGATTGGACAGCAGCCCGT---GGAGGAC---ATTGAGCAGA 1006758 Query 1130 ACCGCATCTACAAGATTTTGGAACTGAACCACTACGACCCAGCGTACGTGGGGAGTATTT 1189 ||||||| ||| |||||| || ||||| ||||||||| | |||| || | | Sbjct 1006759 ACCGCATTTACCGGATTTTACAAATGAACGGCTACGACCCCGAGTACACGGCCTCCGTCT 1006818 Query 1190 TGGTCGGGTGGTGCCAGAAGAAATGGGGCAAGCGAAACACGCTGTGGCTGTTCGGACCTG 1249 | | || ||| |||||||||| || ||||| || || | |||||||| || |||| Sbjct 1006819 TTCTGGGCTGGGCTCAGAAGAAATTCGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTG 1006878 Query 1250 CGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCTATGGAT 1309 | ||||| |||||||||||||| ||||| || ||||| || || ||||| || || || | Sbjct 1006879 CTACCACGGGCAAGACCAACATTGCGGAAGCCATTGCTCACGCGGTGCCCTTTTACGGCT 1006938 Query 1310 GCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATGATTATCT 1369 |||| |||||||| || |||||||||||||||||||| ||| |||| || ||| | |||| Sbjct 1006939 GCGTGAACTGGACTAATGAGAACTTTCCGTTCAACGATTGCCTCGACAAAATGGTGATCT 1006998 Query 1370 GGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATTCTGGGAG 1429 ||||||| |||||||| |||||||||||||| || || | || || || || ||||| | Sbjct 1006999 GGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTAGAGTCAGCCAAGGCCATCCTGGGCG 1007058 Query 1430 GATCTCGGGTGAGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCGACGCCGG 1489 | ||| || |||||||| ||||| | |||| | |||||| || ||||| | Sbjct 1007059 GCAGCAAGGTACCTGTCGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCCACGCCCG 1007118 Query 1490 TCATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGACTACGTTCG 1549 |||| | || |||||||||||||| || || ||| |||||| || || || | Sbjct 1007119 TCATCGTGACGTCCAACACCAACATGTGCGTGGTGATTGACAGGAACAGCACCACCTTTG 1007178 Query 1550 AGCATAAGCAGCCGTTGGAGGACAGGATGTTTAAGCTCGAGCT 1592 |||| |||||||||| ||||| ||||||| ||| | || || Sbjct 1007179 AGCACCAGCAGCCGTTACAGGACCGGATGTTCAAGTTTGAACT 1007221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14868314728455