Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq2002 381 2e-102 >seq2002 Length=4243662 Score = 381 bits (422), Expect = 2e-102 Identities = 497/690 (72%), Gaps = 10/690 (1%) Strand=Plus/Plus Query 847 ATACATGGCGCTCGTCAGGTGGCTCGTGGACAACGGCATCGCGACCGAGCGCGAGTGGAT 906 |||||||| ||| ||| |||||||||||||||| || ||| || | || | ||||| Sbjct 1006541 ATACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGAT 1006600 Query 907 GCGCGAGGACTCGGACGGGTACCTGAGCTACAACGCCACGGGCGCCA----CGCGCGCCC 962 | |||||| || ||| | || ||||||| | | || | || | | Sbjct 1006601 CCAGGAGGACCAGGCTTCCTACATCTCCTTCAACGCC----GTGTCAAATTCCCGGTCTC 1006656 Query 963 AGATCAAGGCCGCGCTCGACAACGCGGCCCGCATCATGGTCAACACGAAGACGGCCGCCG 1022 |||| |||||||| | ||||| || | || ||| | || || | ||| | | Sbjct 1006657 AGATTAAGGCCGCTTTGGACAATGCCTCTAAAATTATGAGCCTGACAAAAATGGCTCCGG 1006716 Query 1023 ACTACCTGGTCGG-CAGGAACCCGCCCCTCGACGTGGAGGACAACAGGATCTACCGGCTG 1081 |||||||| | || ||| | |||| ||| | ||| | ||| | || |||||| | Sbjct 1006717 ACTACCTGATTGGACAGCAGCCCGTGGAG-GACATTGAGCAGAACCGCATTTACCGGATT 1006775 Query 1082 TTTCGCATGAACGGCTACGACCCCGCCTACGCGGGCAGCGTGCTGCTCGGCTGGTGCCGC 1141 || | ||||||||||||||||||| ||| ||| | ||| | || |||||| | Sbjct 1006776 TTACAAATGAACGGCTACGACCCCGAGTACACGGCCTCCGTCTTTCTGGGCTGGGCTCAG 1006835 Query 1142 ACCGGCTTCGGCAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACG 1201 | ||||| ||||| || ||| ||||||| || ||||| || || || |||||||| Sbjct 1006836 AAGAAATTCGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACC 1006895 Query 1202 AACCTCGCCGAGGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAAC 1261 ||| | || || ||||| ||| |||||||||| ||||||||||| |||||||| || Sbjct 1006896 AACATTGCGGAAGCCATTGCTCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAAT 1006955 Query 1262 GAGAACTTCCCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAG 1321 |||||||| || |||||||| ||| | ||||| ||| | ||||||||||||||||||||| Sbjct 1006956 GAGAACTTTCCGTTCAACGATTGCCTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAG 1007015 Query 1322 ATGACGTCCAAGGTCGTCGAGAGCGCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGTC 1381 ||||| |||||||||| ||| |||||||||||||| |||||||||||||| | ||| Sbjct 1007016 ATGACCGCCAAGGTCGTAGAGTCAGCCAAGGCCATCCTGGGCGGCAGCAAGGTACCTGTC 1007075 Query 1382 GACCAGAAGTGCAAGAACTCGCAGCAGATCGAGCCCACGCCCGTCATNNNNNNNNNNNNN 1441 ||||| ||||||||| ||| |||||||| |||||||||||||| Sbjct 1007076 GACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAAC 1007135 Query 1442 NNNNACATGTGCGAGGTCGTCGACGGGAACTCGACCACGTTCGAGCACCGGCAGCCGCTC 1501 ||||||||| ||| | ||| ||||| ||||| || ||||||| ||||||| | Sbjct 1007136 ACCAACATGTGCGTGGTGATTGACAGGAACAGCACCACCTTTGAGCACCAGCAGCCGTTA 1007195 Query 1502 GAGGACAGGATGTTCAAGTTCGAGCTCACC 1531 ||||| ||||||||||||| || |||||| Sbjct 1007196 CAGGACCGGATGTTCAAGTTTGAACTCACC 1007225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13601292427515