Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq11 183 1e-42 seq3 178 4e-41 >seq11 Length=132960392 Score = 183 bits (202), Expect = 1e-42 Identities = 160/199 (80%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1528 CCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATTGCAGAAGCTATTGCCC 1587 |||| ||||| | || ||||| ||||| || |||||||||||||| ||||| ||||||| Sbjct 48532367 CCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCATTGCCC 48532308 Query 1588 ATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATT 1647 | || || ||||| || ||||| || |||||||||||||||||||||| || || |||| Sbjct 48532307 ACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCGGTTCAACGATT 48532248 Query 1648 GTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACTAATAAGGTTGTTGAAT 1707 |||| || |||||| |||| |||||||||||||| || ||||| | ||||| || || | Sbjct 48532247 GTGTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCACCAAGGTCGTAGAGT 48532188 Query 1708 CTGCAAAAGCAATTTTGGG 1726 | || || || || |||| Sbjct 48532187 CAGCCAAGGCCATCCTGGG 48532169 >seq3 Length=181338541 Score = 178 bits (196), Expect = 4e-41 Identities = 181/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 1494 GGCTGGGTGAAGAGAGAGTTCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACC 1553 ||||||| ||| | ||||| || | ||| |||| ||||| | || || |||||| Sbjct 14453856 GGCTGGGCTCAGAAAAAGTTCGGTAAGCGGAACACCATCTGGCTGTTTGGGCCCGCCACC 14453915 Query 1554 ACCGGGAAGACCAACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTT 1613 ||||| ||||||||||| | ||||| ||||||||||| || |||||||| |||| ||| Sbjct 14453916 ACCGGCAAGACCAACATCGTGGAAGCCATTGCCCATGCGGTGCCCTTCTACGGCTATGTG 14453975 Query 1614 AACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGG 1673 |||||||| |||||||||||||| || || |||| || || || ||| |||| |||||| Sbjct 14453976 AACTGGACCAATGAGAACTTTCCGTTCAACAATTGCGTCGACAAGATGGTGATCTGGTGG 14454035 Query 1674 GAGGAGGGAAAAATGACTAATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGG 1729 |||||||| || ||||| ||||| || || || || || || || |||| || Sbjct 14454036 GAGGAGGGCAAGATGACCGCCAAGGTCGTGGAGTCGGCCAAGGCCATCCTGGGCGG 14454091 Score = 86.0 bits (94), Expect = 2e-13 Identities = 203/304 (67%), Gaps = 2/304 (1%) Strand=Plus/Plus Query 2588 TCGGGGCTTTGTACTTCCTGGCTATAAGTATCTTGGGCCTGGTAACGGCCTGGATAAAGG 2647 |||||| |||| |||||||| || ||||| || || || || || || || || || Sbjct 14454909 TCGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAATGGACTCGACAAGGG 14454968 Query 2648 CCCACCTGTCAATAAGGCGGACAGCGTCGCGCTTGAACACGACAAGGCCTATGACCAGCA 2707 || ||||| |||| ||| || || || | |||||||||||||| |||||||| Sbjct 14454969 AGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGCGCACGACAAGGCCTACGACCAGCA 14455028 Query 2708 GCTTAAAGCGGGAGACAACCCATATATAAAATTCAATCACGCTGACCAGGACTTTATAGA 2767 ||| | | || |||||||| || | || | ||| ||||| ||| || || | Sbjct 14455029 GCTCCAGTCAGGGGACAACCCGTACCTCAAGTACAACCACGCCGACGCTGAGTTCCAGCA 14455088 Query 2768 TAGCCTCCAAGACGACCAGTCATTCGGAGGTAATCTTGGAAAGGCTGTATTTCAGGCCAA 2827 || | | | || ||| || || || || ||||| || |||| |||||||| Sbjct 14455089 GCGCTTGGAGCAAGATACGTCTTTTGGGGGCAACCTTGGGCGAGCGGTATGCCAGGCCAA 14455148 Query 2828 -AAAACGTATCTTAGAGCCATTTGGCCTAGTAGAAGATCCTGTCAACACGGCACCTGCAA 2886 |||| | ||| | | || ||||| || || || || | || ||||| |||| || Sbjct 14455149 GAAAAGGGTTCTCA-AACCTTTTGGTCTGGTTGAGGAAGTGGCTAAGACGGCTCCTGGAA 14455207 Query 2887 AAAA 2890 |||| Sbjct 14455208 AAAA 14455211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16215976913510