Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_005889.1 Length=4693 Score E Sequences producing significant alignments: (Bits) Value seq3 462 6e-127 seq11 439 7e-120 >seq3 Length=181338541 Score = 462 bits (512), Expect = 6e-127 Identities = 934/1376 (68%), Gaps = 32/1376 (2%) Strand=Plus/Plus Query 411 TGGAAGAGCACCTGCCTGGAATTTCTGACAACTTTGTAGACTGGGTAACTGGTCAAATTT 470 |||| |||||||| || || ||||||||| |||||| ||||||| | | | Sbjct 14452948 TGGACGAGCACCTCCCGGGTGTTTCTGACAGCTTTGTGAACTGGGTGGCCCAGAAGGAGT 14453007 Query 471 GGGAGCTGCCTCCCGAGTCAGATTTGAATTTGACTCTGATTGAGCAGCCTCAGCTGACGG 530 |||||||||| || || || || || || ||| |||||| || ||| | | || || | Sbjct 14453008 GGGAGCTGCCGCCAGATTCTGACATGGATCTGAATCTGATAGAACAGGCGCCCCTCACCG 14453067 Query 531 TGGCTGACAGAATTCGCCGCGTGTTCCTGTACGAGTGGAACAAATTTTCCAAG---CAGG 587 | || || | | | |||| || ||| ||| |||| | |||| | || Sbjct 14453068 TAGCCGAGAAGCTGCAGCGCGACTTTCTGACCGAATGGAGGCGGGTGAGCAAGGCCCCGG 14453127 Query 588 AGAGCAAATTCTTTGTGCAGTTTGAAAAGGGATCTGAATATTTTCATCTGCACACGCTCG 647 || | || |||||||| ||||||||||| ||||| || || ||| || | Sbjct 14453128 AGGCCCTCTTTTTTGTGCAATTTGAAAAGGGGGAGAGCTATTTCCACCTACACGTCCTGG 14453187 Query 648 TGGAGACCTCCGGCATCTCTTCTATGGTCCTTGGCCGCTACGTGAGTCAGATTCGCGCCC 707 |||||||| | || || ||||| || ||||| | ||||||||||||||||| Sbjct 14453188 TGGAGACCACTGGGGTCAAGAGCATGGTGCTGGGCCGGTTCGTGAGTCAGATTCGCGAGA 14453247 Query 708 AGCTGGTGAAGGTGGTGTTCCAGAAC-ATTGAGCCGCGGATTAACGACTGGGTCGCCATC 766 ||||||| | | || || | | || |||||| || ||||| |||| | Sbjct 14453248 AGCTGGTCA-GCTGCATTTACCGCGGGATCGAGCCGACCATGCCGAACTGGTTCGCGGTG 14453306 Query 767 ACCAAG----GTAAAGAAG--GGCGGAGCCAATAAGGTGGTGGATTCTGGGTATATTCCC 820 |||||| |||| | | ||||| | || |||||||| || | || || ||| Sbjct 14453307 ACCAAGACGCGTAATGGCGCCGGCGGGGGGAACAAGGTGGTAGACGACTGCTACATCCCC 14453366 Query 821 GCCTACCTGCTGCCGAAGGTCCAACCAGAGCTTCAGTGGGCGTGGACTAACCTCGAAGAG 880 ||||||||| || || ||| || ||||| |||||||||||||||||| | || || Sbjct 14453367 AACTACCTGCTCCCCAAAACCCAGCCGGAGCTCCAGTGGGCGTGGACTAACATGGAGCAG 14453426 Query 881 TATAAATTGGCCGCCCTCAATCTGGAGGAGCGCAAACGGCTCGTCGCTCAGTTTCAGCTT 940 |||| | | | ||||| | |||||| ||||||||||| |||||| | || Sbjct 14453427 TATATAAGCGTGTGTTTAAATCTTGCGGAGCGTAAACGGCTCGTGGCTCAGCAT----TT 14453482 Query 941 GAGTCCTCGCAGCGCT-CGCAAGAGGCATCTTCCCAGAGGGAC-GTTTCGG----CTGAC 994 || | |||| |||| ||| || | |||| | | || ||||| Sbjct 14453483 GACACACATCAGCCAGACGCAGGAG-CAGAA-CAAAGAGAATCAGAATCCCAATTCTGAC 14453540 Query 995 CCG---GTCATCAAGAGCAAGACTTCCCAGAAATACATGGCGCTGGTAAGCTGGCTGGTG 1051 || || ||| | || || ||| ||||||| ||| || | ||||| || Sbjct 14453541 ACGCCTGTGATCCGGTCAAAAACCTCCGCTCGCTACATGGAGCTAGTCGGGTGGCTCATG 14453600 Query 1052 GAACATGGCATCACTTCCGAGAAGCAGTGGATTCAGGAGAATCAGGAGAGCTACCTGTCC 1111 || | |||||||| || || ||||| ||||| |||||| | |||| |||| | ||| Sbjct 14453601 GACAAAGGCATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGGCCTCCTACATTTCC 14453660 Query 1112 TTCAACTCCACGGGAAACTCTCGGAGCCAGATTAAAGCCGCGCTTGACAACGCGTCAAAA 1171 |||||| | || ||| || ||| || |||||||| || || ||||| || ||| Sbjct 14453661 TTCAACGCGGCGTCAAATTCGCGGTCACAAATTAAAGCGGCCCTGGACAATGCCGGCAAA 14453720 Query 1172 ATTATGAGTCTGACCAAATCTGCCTCAGACTATCTCGTGGGACAGA--CTGTTCCAGAGG 1229 || ||||| ||||||||| | || | ||||| || || || ||| | | | |||| Sbjct 14453721 ATCATGAGCCTGACCAAAACGGCTCCGGACTACCTGGTTGGGCAGCAGCCGGTG--GAGG 14453778 Query 1230 ACATTTCTGAAAACAGAATCTGGCAGATTTTTGATCTCAACGGCTACGACCCGGCATACG 1289 ||||| || ||| | || | | ||| || | | ||||| |||||||| || | Sbjct 14453779 ACATTCGGGACAACCGCATTTACCGGATCTTACAAATGAACGGGTACGACCCCCAGTAGG 14453838 Query 1290 CGGGCTCTGTTCTCTACGGCTGGTGCACTCGCGCCTTT-GGAAAGAGGAACACCGTCTGG 1348 ||| ||| || || |||||| || | || || ||| |||||||| ||||| Sbjct 14453839 CGGCCTCCGTGTTCCTGGGCTGG-GCTCAGAAAAAGTTCGGTAAGCGGAACACCATCTGG 14453897 Query 1349 CTGTATGGACCCGCGACCACCGGAAAGACCAACATCGCGGAAGCCATCTCTCACACCGTG 1408 |||| ||| ||||| |||||||| ||||||||||||| ||||||||| | || | ||| Sbjct 14453898 CTGTTTGGGCCCGCCACCACCGGCAAGACCAACATCGTGGAAGCCATTGCCCATGCGGTG 14453957 Query 1409 CCCTTTTATGGCTGTGTGAACTGGACTAATGAGAACTTNNNNNNNNNNNNNNNNNNNGAA 1468 ||||| || |||| |||||||||||| ||||||||||| || Sbjct 14453958 CCCTTCTACGGCTATGTGAACTGGACCAATGAGAACTTTCCGTTCAACAATTGCGTCGAC 14454017 Query 1469 AAAATGTTGATCTGGTGGGAGGAGGGAAAGATGACCAGCAAGGTGGTGGAACCCGCCAAG 1528 || ||| ||||||||||||||||||| ||||||||| |||||| ||||| | |||||| Sbjct 14454018 AAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTGGAGTCGGCCAAG 14454077 Query 1529 GCCATCTTgggggggTCTAGAGTACGAGTGGATCAAAAATGTAAATCCTCTGTACAAGTA 1588 |||||| |||| || | ||||| ||||| ||||| || || || || | || | Sbjct 14454078 GCCATCCTGGGCGGCAGCAAGGTACGTGTGGACCAAAAGTGCAAGTCATCGGCCCAGATC 14454137 Query 1589 GACTCTACCCCGGTGATTATCACCTCCAATACTAACATGTGTGTGGTGGTGGATGGGAAC 1648 ||| | ||||| || || | || ||||| || |||||||| | |||| | || |||||| Sbjct 14454138 GACCCCACCCCCGTCATCGTGACGTCCAACACCAACATGTGCGCGGTGATTGACGGGAAC 14454197 Query 1649 TCCACGACCTTTGAACACCAGCAGCCGCTGGAAGACCGCATGTTCAGATTTGAACTCATG 1708 ||| || |||||||||||||||||| || ||||||| ||||||| |||||||| | Sbjct 14454198 AGCACCACTTTTGAACACCAGCAGCCGTTGCAAGACCGGATGTTCAAGTTTGAACTTACC 14454257 Query 1709 CGGCGGCTCCCGCCAGATTTTGGCAAGATTACCAAGCAGGAAGTCAAAGACTTTTT 1764 | || || | || ||||||||| | | ||| ||||||||||||||||| || Sbjct 14454258 CACCGTCTGGATCACGACTTTGGCAAGGTCAGCAAACAGGAAGTCAAAGACTTCTT 14454313 Score = 219 bits (242), Expect = 1e-53 Identities = 308/432 (71%), Gaps = 3/432 (1%) Strand=Plus/Plus Query 2298 CCCCGAAACCCAAGGCCAATCAACAGAAGCAAGATAACGCTCGAGGTCTTGTGCTTCCTG 2357 |||| | |||| || |||||||| | || || ||| |||| |||||||||||||||| Sbjct 14454869 CCCCCCAGCCCAGAGCGAATCAACAACACCAGGACAACTCTCGGGGTCTTGTGCTTCCTG 14454928 Query 2358 GGTACAAGTATCTTGGTCCTGGGAACGGCCTTGATAAGGGCGATCCTGTCAATTTTGCTG 2417 |||||||||| || || || || || || || ||||| || || ||||| || | Sbjct 14454929 GGTACAAGTACCTCGGACCCTTCAATGGACTCGACAAGGGAGAGCCGGTCAACGAGGCAG 14454988 Query 2418 ACGAGGTTGCCCGAGAGCACGACCTCTCCTACCAGAAACAGCTTGAGGCGGGCGATAACC 2477 ||| | |||| | ||||||| ||||| | | ||||| || | || || |||| Sbjct 14454989 ACGCCGCGGCCCTCGCGCACGACAAGGCCTACGACCAGCAGCTCCAGTCAGGGGACAACC 14455048 Query 2478 CTTACCTCAAGTACAACCACGCGGACGCAGAGTTTCAGGAGAAACTCGCTTCTGACACTT 2537 | |||||||||||||||||||| ||||| ||||| ||| || | | || || | Sbjct 14455049 CGTACCTCAAGTACAACCACGCCGACGCTGAGTTCCAGCAGCGCTTGGAGCAAGATACGT 14455108 Query 2538 CTTTTGGGGGAAACCTTGGGAAGGCTGTTTTCCAGGCTAAAAAGAGGATTCTCGAACCTC 2597 |||||||||| ||||||||| || || | |||||| || || ||| ||||| ||||| Sbjct 14455109 CTTTTGGGGGCAACCTTGGGCGAGCGGTATGCCAGGCCAAGAAAAGGGTTCTCAAACCTT 14455168 Query 2598 TTGGCCTGGTTGAGACGCCGGATAAAACGGCGCCTGCGGCAAAAAAGAGGCCTCTAGAGC 2657 |||| ||||||||| || ||| ||||| ||| | ||||||||| || |||||| Sbjct 14455169 TTGGTCTGGTTGAGGAAGTGGCTAAGACGGCTCCT---GGAAAAAAGAGACCGCTAGAGG 14455225 Query 2658 AGAGTCCTCAAGAGCCAGACTCCTCGAGCGGAGTTGGCAAGAAAGGCAAACAGCCTGCCA 2717 | ||| ||||| || ||||| || || | ||||| |||| | || || || | Sbjct 14455226 ACTCTCCCCAAGAACCGGACTCTTCTGTGGGCATCGGCAAATCAGGCCAGCAACCCGCTA 14455285 Query 2718 GAAAGAGACTCA 2729 ||| ||| ||| Sbjct 14455286 AAAAAAGATTCA 14455297 >seq11 Length=132960392 Score = 439 bits (486), Expect = 7e-120 Identities = 900/1324 (68%), Gaps = 44/1324 (3%) Strand=Plus/Minus Query 411 TGGAAGAGCACCTGCCTGGAATTTCTGACAACTTTGTAGACTGGGTAACTGGTCAAATTT 470 |||| ||||| | || || |||||||||| |||||| ||||||| ||| | | Sbjct 48533309 TGGATGAGCATTTACCGGGTATTTCTGACAGCTTTGTGAACTGGGTGGCTGAGAAGGAAT 48533250 Query 471 GGGAGCTGCCTCCCGAGTCAGATTTGAATTTGACTCTGATTGAGCAGCCTCAGCTGACGG 530 ||||| |||| || || || || || || || ||||||||||||| | | ||||| | Sbjct 48533249 GGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAGGCACCCCTGACCG 48533190 Query 531 TGGCTGACAGAATTCGCCGCGTGTTCCTGTACGAGTGGAACAAATTTTCCAAG---CAGG 587 |||| | | | | | || || ||| || ||| | | ||| | || Sbjct 48533189 TGGCCAAAAAGCTACAGCACGACTTTCTGACGGAATGGTGCCGTGTGAGTAAGGCCCCGG 48533130 Query 588 AGAGCAAATTCTTTGTGCAGTTTGAAAA--GGGATCTGAA-TATTTTCATCTGCACACGC 644 || | || ||||| || |||||||| |||| || |||||||| || ||| || Sbjct 48533129 AGGCCCTCTTTTTTGTTCAATTTGAAAAAGGGGA---GAGCTATTTTCACCTCCACGTGC 48533073 Query 645 TCGTGGAGACCTCCGGCATCTCTTCTATGGTCCTTGGCCGCTACGTGAGTCAGATTCGCG 704 | |||||||| |||| | ||||| || ||||| | |||||||||||| ||| Sbjct 48533072 TTGTGGAGACTACCGGGGTGAAGAGCATGGTGCTAGGCCGTTTTGTGAGTCAGATTTGCG 48533013 Query 705 CCCAGCTGGTGAAGGTGGTGTTCCAGAACATTGAGCCGCGGATTAACGACTGGGTCGCCA 764 ||||||| || | | || || |||||| || ||||| |||| Sbjct 48533012 ATAAGCTGGTTCAGCGCATTTACCGCGGGATCGAGCCGACCATGCCGAACTGGTTCGCGG 48532953 Query 765 TCACCAAG----GTAAAGAAG--GGCGGAGCCAATAAGGTGGTGGATTCTGGGTATATTC 818 |||| || |||| | | || || | || ||||||||||| | ||||||| Sbjct 48532952 TCACAAAAACGCGTAATGGCGCCGGTGGCGGGAACAAGGTGGTGGACGAGTGCTATATTC 48532893 Query 819 CCGCCTACCTGCTGCCGAAGGTCCAACCAGAGCTTCAGTGGGCGTGGACTAACCTCGAAG 878 || ||||||||| || || |||||| || ||||||||||||||||||||| | || | Sbjct 48532892 CCAACTACCTGCTCCCCAAAACCCAACCGGAACTTCAGTGGGCGTGGACTAACATGGAGG 48532833 Query 879 AGTATAAATTGGCCGCCCTCAATCTGGAGG-AGCGCAAACGGCTCGTCGCTCAGTTTCAG 937 |||||| | | | | | || ||| |||||||||||||||| |||||| | | Sbjct 48532832 AGTATATAA-GCATGTGTTTGAACTTCAGGGAGCGCAAACGGCTCGTGGCTCAGCACCTG 48532774 Query 938 -----CTTGAGTC---CTC-GCAGCGCTCGCAAGAGGCATCTT-CCCAGAGG--GACGTT 985 | | |||| ||| | ||| |||| | | |||| | |||| Sbjct 48532773 ACGCACGTCAGTCAGACTCAGGAGCAGAACAAAGAAAATTTGTACCCAAATTCTGACGCA 48532714 Query 986 TCGGCTGACCCGGTCATCAAGAGCAAGACTTCCCAGAAATACATGGCGCTGGTAAGCTGG 1045 | | ||| ||||||| || || || | |||||||| |||||| | ||| Sbjct 48532713 CCTG-TGATCCGGTCA--------AAAACCTCTGCGCGATACATGGAGCTGGTCGGGTGG 48532663 Query 1046 CTGGTGGAACATGGCATCACTTCCGAGAAGCAGTGGATTCAGGAGAATCAGGAGAGCTAC 1105 || ||||| | || ||||| || || ||||| ||||| |||||| | |||| |||| Sbjct 48532662 CTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGGCTTCCTAC 48532603 Query 1106 CTGTCCTTCAACTCCACGGGAAACTCTCGGAGCCAGATTAAAGCCGCGCTTGACAACGCG 1165 | ||||||||| || | ||| || ||| |||||||| ||||| | ||||| || Sbjct 48532602 ATCTCCTTCAACACCGTGTCAAATTCCCGGTCTCAGATTAAGGCCGCTTTGGACAATGCC 48532543 Query 1166 TCAAAAATTATGAGTCTGACCAAATCTGCCTCAGACTATCTCGTGGGACAGACTGTTCCA 1225 || ||||||||||| ||||| ||| | || ||||||| || | |||||| | | | Sbjct 48532542 TCTAAAATTATGAGCCTGACAAAAACGGCTCCAGACTACCTGATTGGACAG-CAGCCCGT 48532484 Query 1226 G-AGGACATTTCTGAAAACAGAATCTGGCAGATTTTTGATCTCAACGGCTACGACCCGGC 1284 | |||||||| | ||| | || | |||||| | | |||||||| ||||| | Sbjct 48532483 GGAGGACATTGAGCAGAACCGCATTTACTGGATTTTACAAATGAACGGCTATGACCCCGA 48532424 Query 1285 ATACGCGGGCTCTGT-TCTCTACGGCTGGTGCACTCGCGCC-TTTGGAAAGAGGAACACC 1342 ||||||| ||| || | ||| |||||| || | | ||||| ||| |||| ||| Sbjct 48532423 GTACGCGGCCTCCGTCTTTCTG-GGCTGG-GCTCAGAAGAAATTTGGGAAGCGGAATACC 48532366 Query 1343 GTCTGGCTGTATGGACCCGCGACCACCGGAAAGACCAACATCGCGGAAGCCATCTCTCAC 1402 ||||||||| ||| || || ||||| || ||||||||||| ||||||||||| | ||| Sbjct 48532365 ATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCATTGCCCAC 48532306 Query 1403 ACCGTGCCCTTTTATGGCTGTGTGAACTGGACTAATGAGAACTTNNNNNNNNNNNNNNNN 1462 | ||||||||||| ||||| ||||||||||||||||||||||| Sbjct 48532305 GCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCGGTTCAACGATTGT 48532246 Query 1463 NNNGAAAAAATGTTGATCTGGTGGGAGGAGGGAAAGATGACCAGCAAGGTGGTGGAACCC 1522 || |||||| ||||||||||||||||||| |||||||||| |||||| || || | Sbjct 48532245 GTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCACCAAGGTCGTAGAGTCA 48532186 Query 1523 GCCAAGGCCATCTTgggggggTCTAGAGTACGAGTGGATCAAAAATGTAAATCCTCTGTA 1582 |||||||||||| |||| | | ||||| || | ||||| || || || || | Sbjct 48532185 GCCAAGGCCATCCTGGGCAGCAGCAAGGTACGTGTCAACCAAAAGTGCAAGTCATCGGCC 48532126 Query 1583 CAAGTAGACTCTACCCCGGTGATTATCACCTCCAATACTAACATGTGTGTGGTGGTGGAT 1642 || | ||| | || || || || | || ||||| || |||||||| |||||| | || Sbjct 48532125 CAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCAACATGTGCGTGGTGATTGAC 48532066 Query 1643 GGGAACTCCACGACCTTTGAACACCAGCAGCCGCTGGAAGACCGCATGTTCAGATTTGAA 1702 |||||| | | |||||||| || ||||||||| | | ||||| ||||||| |||||| Sbjct 48532065 GGGAACAGCGCCACCTTTGAGCATCAGCAGCCGTTACAGGACCGGATGTTCAAGTTTGAA 48532006 Query 1703 CTCA 1706 |||| Sbjct 48532005 CTCA 48532002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14895290960980