Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq3 170 6e-39 seq11 165 3e-37 >seq3 Length=181338541 Score = 170 bits (188), Expect = 6e-39 Identities = 180/235 (77%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 1539 CCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCC 1598 |||| ||||| | || || || |||||||| ||||||||||| | || || ||||||| Sbjct 14453890 CCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACATCGTGGAAGCCATTGCCC 14453949 Query 1599 ATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACT 1658 |||| || |||||||| |||| ||| |||||||| ||||||||||| || || || | | Sbjct 14453950 ATGCGGTGCCCTTCTACGGCTATGTGAACTGGACCAATGAGAACTTTCCGTTCAACAATT 14454009 Query 1659 GCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTGGAAT 1718 |||| || || ||| | || |||||||||||||| || |||||| || || ||||| | Sbjct 14454010 GCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTGGAGT 14454069 Query 1719 CCGCAAAAGCGATACTgggggggTCTGC--TGTACGAGTTGATCAAAAGTGTAAG 1771 | || || || || ||||| || | || ||||| || || |||||||| ||| Sbjct 14454070 CGGCCAAGGCCATCCTGGGCGG--CAGCAAGGTACGTGTGGACCAAAAGTGCAAG 14454122 >seq11 Length=132960392 Score = 165 bits (182), Expect = 3e-37 Identities = 181/239 (76%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 1535 AATGCCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCAACATAGCCGAGGCTATT 1594 ||| |||| ||||| | || ||||| ||||| || ||||||||||| || || || ||| Sbjct 48532371 AATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCATT 48532312 Query 1595 GCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAAT 1654 ||||| || || ||||| || ||||| || |||||||||||||||||||| | || || Sbjct 48532311 GCCCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCGGTTCAAC 48532252 Query 1655 GACTGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTG 1714 || || || || |||||| | || |||||||||||||| || ||||||| || || || Sbjct 48532251 GATTGTGTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCACCAAGGTCGTA 48532192 Query 1715 GAATCCGCAAAAGCGATACTgggggggTCTGC--TGTACGAGTTGATCAAAAGTGTAAG 1771 || || || || || || ||||| | | || ||||| || | |||||||| ||| Sbjct 48532191 GAGTCAGCCAAGGCCATCCTGGGCAG--CAGCAAGGTACGTGTCAACCAAAAGTGCAAG 48532135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16299119370570