Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq3 513 4e-142 seq11 480 2e-132 >seq3 Length=181338541 Score = 513 bits (568), Expect = 4e-142 Identities = 949/1378 (69%), Gaps = 28/1378 (2%) Strand=Plus/Plus Query 398 GACGTGGAGGAACATCTGCCTGGAATTTCTGACAGCTTTGTGGACTGGGTAACTGGTCAA 457 ||| |||| || || || || || ||||||||||||||||| ||||||| | | Sbjct 14452944 GACCTGGACGAGCACCTCCCGGGTGTTTCTGACAGCTTTGTGAACTGGGTGGCCCAGAAG 14453003 Query 458 ATTTGGGAGCTGCCTCCAGAGTCAGATTTAAATTTGACTCTGGTTGAACAGCCTCAGTTG 517 ||||||||||| ||||| || || | || ||| |||| | |||||| | | | Sbjct 14453004 GAGTGGGAGCTGCCGCCAGATTCTGACATGGATCTGAATCTGATAGAACAGGCGCCCCTC 14453063 Query 518 ACGGTGGCTGATAGAATTCGCCGCGTGTTCCTGTACGAGTGGAACAAATTTTCCAAG--- 574 || || || || | | | |||| || ||| ||| |||| | |||| Sbjct 14453064 ACCGTAGCCGAGAAGCTGCAGCGCGACTTTCTGACCGAATGGAGGCGGGTGAGCAAGGCC 14453123 Query 575 CAGGAGTCCAAATTCTTTGTGCAGTTTGAAAAGGGATCTGAATATTTTCATCTGCACACG 634 | |||| || || |||||||| ||||||||||| ||||| || || ||| Sbjct 14453124 CCGGAGGCCCTCTTTTTTGTGCAATTTGAAAAGGGGGAGAGCTATTTCCACCTACACGTC 14453183 Query 635 CTTGTGGAGACCTCCGGCATCTCTTCCATGGTCCTCGGCCGCTACGTGAGTCAGATTCGC 694 || ||||||||| | || || |||||| || ||||| | |||||||||||||||| Sbjct 14453184 CTGGTGGAGACCACTGGGGTCAAGAGCATGGTGCTGGGCCGGTTCGTGAGTCAGATTCGC 14453243 Query 695 GCCCAGCTGGTGAAAGTGGTCTTCCAGGGAATTGAACC--CCAGATCAACGACTGGGTCG 752 | ||||||| | | | || || || || || ||| | | ||||| ||| Sbjct 14453244 GAGAAGCTGGTCAGCTGCATTTACCGCGGGATCGAGCCGACCATGCCGA--ACTGGTTCG 14453301 Query 753 CCATCACCAAG----GTAAAGAAG--GGCGGAGCCAATAAGGTGGTGGATTCTGGGTATA 806 | | |||||| |||| | | ||||| | || |||||||| || | || | Sbjct 14453302 CGGTGACCAAGACGCGTAATGGCGCCGGCGGGGGGAACAAGGTGGTAGACGACTGCTACA 14453361 Query 807 TTCCCGCCTACCTGCTGCCGAAGGTCCAACCGGAGCTTCAGTGGGCGTGGACAAACCTGG 866 | ||| ||||||||| || || ||| |||||||| |||||||||||||| ||| ||| Sbjct 14453362 TCCCCAACTACCTGCTCCCCAAAACCCAGCCGGAGCTCCAGTGGGCGTGGACTAACATGG 14453421 Query 867 ACGAGTATAAATTGGCCGCCCTGAATCTGGAGGAGCGCAAACGGCTCGTCGCGCAGTTTC 926 | |||||| | | | ||||| | |||||| ||||||||||| || ||| | Sbjct 14453422 AGCAGTATATAAGCGTGTGTTTAAATCTTGCGGAGCGTAAACGGCTCGTGGCTCAGCATT 14453481 Query 927 TGGCAGA-ATCCTCGCAGCGCTCGCAGGAGGCGGCTTCGCAGCGTGAGT-TCTCGG--CT 982 || || | ||| | ||| |||||||| | || | || || | || Sbjct 14453482 TGACACACATCAGC-CAGA---CGCAGGAGCAGAACAAAGAGAATCAGAATCCCAATTCT 14453537 Query 983 GACCCG---GTCATCAAAAGCAAGACTTCCCAGAAATACATGGCGCTCGTCAACTGGCTC 1039 ||| || || ||| || || ||| ||||||| ||| ||| |||||| Sbjct 14453538 GACACGCCTGTGATCCGGTCAAAAACCTCCGCTCGCTACATGGAGCTAGTCGGGTGGCTC 14453597 Query 1040 GTGGAGCACGGCATCACTTCCGAGAAGCAGTGGATCCAGGAAAATCAGGAGAGCTACCTC 1099 |||| | |||||||| || || ||||| ||||||||||| | |||| |||| | Sbjct 14453598 ATGGACAAAGGCATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGGCCTCCTACATT 14453657 Query 1100 TCCTTCAACTCCACCGGCAACTCTCGGAGCCAGATCAAGGCCGCGCTCGACAACGCGACC 1159 ||||||||| | | || || ||| || || || || || || ||||| || | Sbjct 14453658 TCCTTCAACGCGGCGTCAAATTCGCGGTCACAAATTAAAGCGGCCCTGGACAATGCCGGC 14453717 Query 1160 AAAATTATGAGTCTGACAAAAAGCGCGGTGGACTACCTCGTGGGG-AGCT-CCGTTCCCG 1217 ||||| ||||| ||||| |||| || ||||||||| || ||| ||| ||| | | Sbjct 14453718 AAAATCATGAGCCTGACCAAAACGGCTCCGGACTACCTGGTTGGGCAGCAGCCGGTG--G 14453775 Query 1218 AGGACATTTCAAAAAACAGAATCTGGCAAATTTTTGAGATGAATGGCTACGACCCGGCCT 1277 |||||||| | ||| | || | | || || | ||||| || |||||||| | Sbjct 14453776 AGGACATTCGGGACAACCGCATTTACCGGATCTTACAAATGAACGGGTACGACCCCCAGT 14453835 Query 1278 ACGCGGGATCCATCCTCTACGGCTGGTGTCAGCGCTCCTTCAACAAGAGGAACACCGTCT 1337 | |||| ||| | || |||||| |||| ||| ||| |||||||| ||| Sbjct 14453836 AGGCGGCCTCCGTGTTCCTGGGCTGGGCTCAGAAAAAGTTCGGTAAGCGGAACACCATCT 14453895 Query 1338 GGCTCTACGGACCCGCCACGACCGGCAAGACCAACATCGCGGAGGCCATCGCCCACACTG 1397 |||| | || |||||||| ||||||||||||||||||| ||| ||||| ||||| | | Sbjct 14453896 GGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACATCGTGGAAGCCATTGCCCATGCGG 14453955 Query 1398 TGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAACTTTCCCTTTAATGACTGTGTGG 1457 ||||||| ||||||| ||||||||||||||||| |||||||| || || | || || | Sbjct 14453956 TGCCCTTCTACGGCTATGTGAACTGGACCAATGAGAACTTTCCGTTCAACAATTGCGTCG 14454015 Query 1458 ACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGACCAACAAGGTGGTTGAATCCGCCA 1517 |||| ||| | || |||||||||||||| ||||||||| |||||| || || || |||| Sbjct 14454016 ACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTGGAGTCGGCCA 14454075 Query 1518 AGGCCATCCTGGGGGGCTCAAAGGTGCGGGTCGATCAGAAATGTAAATCCTCTGTTCAAA 1577 ||||||||||||| ||| ||||| || || || || || || || || || | || | Sbjct 14454076 AGGCCATCCTGGGCGGCAGCAAGGTACGTGTGGACCAAAAGTGCAAGTCATCGGCCCAGA 14454135 Query 1578 TTGATTCTACCCCTGTCATTGTAACTTCCAATACAAACATGTGTGTGGTGGTGGATGGGA 1637 | || | ||||| ||||| || || ||||| || |||||||| | |||| | || |||| Sbjct 14454136 TCGACCCCACCCCCGTCATCGTGACGTCCAACACCAACATGTGCGCGGTGATTGACGGGA 14454195 Query 1638 ATTCCACGACCTTTGAACACCAGCAGCCGCTGGAGGACCGCATGTTCAAATTTGAACTGA 1697 | ||| || |||||||||||||||||| || | ||||| |||||||| |||||||| | Sbjct 14454196 ACAGCACCACTTTTGAACACCAGCAGCCGTTGCAAGACCGGATGTTCAAGTTTGAACTTA 14454255 Query 1698 CTAAGCGGCTCCCGCCAGATTTTGGCAAGATTACTAAGCAGGAAGTCAAGGACTTTTT 1755 | | || || | || ||||||||| | | || ||||||||||| ||||| || Sbjct 14454256 CCCACCGTCTGGATCACGACTTTGGCAAGGTCAGCAAACAGGAAGTCAAAGACTTCTT 14454313 Score = 214 bits (236), Expect = 5e-52 Identities = 264/357 (74%), Gaps = 7/357 (2%) Strand=Plus/Plus Query 2271 TGGGCCTTGAAGC---GGGCCCACCGAAACCAAAACCCAATCAGCAGCATCAAGATCAAG 2327 ||||| ||||| | | |||| || | || | | | ||||| || || || || | Sbjct 14454850 TGGGCTTTGAAACCTGGAGCCCCCC--AGCCCAGAGCGAATCAACAACACCAGGACAACT 14454907 Query 2328 CCCGTGGTCTTGTGCTGCCTGGTTATAACTATCTCGGACCCGGAAACGGTCTCGATCGAG 2387 | || ||||||||||| ||||| || || || ||||||||| || || ||||| | Sbjct 14454908 CTCGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAATGGACTCGACAAGG 14454967 Query 2388 GAGAGCCTGTCAACAGGGCAGACGAGGTCGCGCGAGAGCACGACATCTCGTACAACGAGC 2447 ||||||| |||||| |||||||| | || | | |||||||| | ||| || ||| Sbjct 14454968 GAGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGCGCACGACAAGGCCTACGACCAGC 14455027 Query 2448 AGCTTGAGGCGGGAGACAACCCCTACCTCAAGTACAACCACGCGGACGCCGAGTTTCAGG 2507 |||| || | || |||||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct 14455028 AGCTCCAGTCAGGGGACAACCCGTACCTCAAGTACAACCACGCCGACGCTGAGTTCCAGC 14455087 Query 2508 AGAAGCTCGCCG-ACGACACATCCTTCGGGGGAAACCTCGGAAAGGCAGTCTTTCAGGCC 2566 || ||| | | | || || || || ||||| ||||| || || || | |||||| Sbjct 14455088 AG-CGCTTGGAGCAAGATACGTCTTTTGGGGGCAACCTTGGGCGAGCGGTATGCCAGGCC 14455146 Query 2567 AAGAAAAGGGTTCTCGAACCTTTTGGCCTGGTTGAAGAGGGTGCTAAGACGGCCCCT 2623 ||||||||||||||| |||||||||| |||||||| || | ||||||||||| ||| Sbjct 14455147 AAGAAAAGGGTTCTCAAACCTTTTGGTCTGGTTGAGGAAGTGGCTAAGACGGCTCCT 14455203 >seq11 Length=132960392 Score = 480 bits (532), Expect = 2e-132 Identities = 916/1336 (69%), Gaps = 40/1336 (3%) Strand=Plus/Minus Query 389 GTCCCATTTGACGTGGAGGAACATCTGCCTGGAATTTCTGACAGCTTTGTGGACTGGGTA 448 ||||| |||| |||| || ||| | || || |||||||||||||||||| ||||||| Sbjct 48533322 GTCCCTAGTGACCTGGATGAGCATTTACCGGGTATTTCTGACAGCTTTGTGAACTGGGTG 48533263 Query 449 ACTGGTCAAATTTGGGAGCTGCCTCCAGAGTCAGATTTAAATTTGACTCTGGTTGAACAG 508 ||| | |||||| |||| || || || || | || || |||| |||| ||| Sbjct 48533262 GCTGAGAAGGAATGGGAGTTGCCCCCGGATTCTGACATGGATCAGAATCTGATTGAGCAG 48533203 Query 509 CCTCAGTTGACGGTGGCTGATAGAATTCGCCGCGTGTTCCTGTACGAGTGGAACAAATTT 568 | | |||| ||||| | | | | | || || ||| || ||| | | Sbjct 48533202 GCACCCCTGACCGTGGCCAAAAAGCTACAGCACGACTTTCTGACGGAATGGTGCCGTGTG 48533143 Query 569 TCCAAG---CAGGAGTCCAAATTCTTTGTGCAGTTTGAAAA--GGGATCTGAA-TATTTT 622 ||| | |||| || || ||||| || |||||||| |||| || |||||| Sbjct 48533142 AGTAAGGCCCCGGAGGCCCTCTTTTTTGTTCAATTTGAAAAAGGGGA---GAGCTATTTT 48533086 Query 623 CATCTGCACACGCTTGTGGAGACCTCCGGCATCTCTTCCATGGTCCTCGGCCGCTACGTG 682 || || ||| |||||||||||| |||| | |||||| || ||||| | ||| Sbjct 48533085 CACCTCCACGTGCTTGTGGAGACTACCGGGGTGAAGAGCATGGTGCTAGGCCGTTTTGTG 48533026 Query 683 AGTCAGATTCGCGCCCAGCTGGTGAAAGTGGTCTTCCAGGGAATTGAACC--CCAGATCA 740 ||||||||| ||| ||||||| | | | || || || || || ||| | Sbjct 48533025 AGTCAGATTTGCGATAAGCTGGTTCAGCGCATTTACCGCGGGATCGAGCCGACCATGCCG 48532966 Query 741 ACGACTGGGTCGCCATCACCAAG----GTAAAGAAG--GGCGGAGCCAATAAGGTGGTGG 794 | ||||| |||| |||| || |||| | | || || | || |||||||||| Sbjct 48532965 A--ACTGGTTCGCGGTCACAAAAACGCGTAATGGCGCCGGTGGCGGGAACAAGGTGGTGG 48532908 Query 795 ATTCTGGGTATATTCCCGCCTACCTGCTGCCGAAGGTCCAACCGGAGCTTCAGTGGGCGT 854 | | ||||||||| ||||||||| || || ||||||||| ||||||||||||| Sbjct 48532907 ACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAACCCAACCGGAACTTCAGTGGGCGT 48532848 Query 855 GGACAAACCTGGACGAGTATAAATTGGCCGCCCTGAATCTGGAGGAGCGCAAACGGCTCG 914 |||| ||| |||| ||||||| | |||| | ||||||||||||||||| Sbjct 48532847 GGACTAACATGGAGGAGTATATAAGCATGTGTTTGAACTTCAGGGAGCGCAAACGGCTCG 48532788 Query 915 TCGCGCAGTTTCTGGCAGAATCCTCGCAGCGCTCGCAGGAGGCGGCTTCGCAGCGTGAGT 974 | || ||| ||| | | | ||| | |||||| | | | || Sbjct 48532787 TGGCTCAGCACCTGACGCACGTCAGTCAGA---CTCAGGAGCAGAACAAAGAAAATTTGT 48532731 Query 975 TCTCGG---CTGAC---CCGGTCATCAAAAGCAAGACTTCCCAGAAATACATGGCGCTCG 1028 | | ||||| || || ||| || || || | |||||||| ||| | Sbjct 48532730 ACCCAAATTCTGACGCACCTGTGATCCGGTCAAAAACCTCTGCGCGATACATGGAGCTGG 48532671 Query 1029 TCAACTGGCTCGTGGAGCACGGCATCACTTCCGAGAAGCAGTGGATCCAGGAAAATCAGG 1088 || ||||||||||| | || ||||| || || ||||| ||||||||||| | |||| Sbjct 48532670 TCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGATCCAGGAGGACCAGG 48532611 Query 1089 AGAGCTACCTCTCCTTCAACTCCACCGGCAACTCTCGGAGCCAGATCAAGGCCGCGCTCG 1148 |||| ||||||||||| || || || ||| ||||| |||||||| | | Sbjct 48532610 CTTCCTACATCTCCTTCAACACCGTGTCAAATTCCCGGTCTCAGATTAAGGCCGCTTTGG 48532551 Query 1149 ACAACGCGACCAAAATTATGAGTCTGACAAAAAGCGCGGTGGACTACCTCGTGGGG-AGC 1207 |||| || | ||||||||||| |||||||||| || |||||||| | || ||| Sbjct 48532550 ACAATGCCTCTAAAATTATGAGCCTGACAAAAACGGCTCCAGACTACCTGATTGGACAGC 48532491 Query 1208 T--CCGTTCCCGAGGACATTTCAAAAAACAGAAT---CTGGCAAATTTTTGAGATGAATG 1262 |||| ||||||||| | ||| | || |||| ||||| | ||||| | Sbjct 48532490 AGCCCGTG---GAGGACATTGAGCAGAACCGCATTTACTGG---ATTTTACAAATGAACG 48532437 Query 1263 GCTACGACCCGGCCTACGCGGGATCCATCCTCTACGGCTGGTGTCAGCGCTCCTTCAACA 1322 |||| ||||| | ||||||| ||| || | |||||| |||| || | Sbjct 48532436 GCTATGACCCCGAGTACGCGGCCTCCGTCTTTCTGGGCTGGGCTCAGAAGAAATTTGGGA 48532377 Query 1323 AGAGGAACACCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACATCGCGGAGG 1382 || |||| ||| ||||||| | || || || || || |||||||||||||| ||||| | Sbjct 48532376 AGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAG 48532317 Query 1383 CCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAACTTTCCCT 1442 |||| |||||| | ||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 48532316 CCATTGCCCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAATGAGAACTTTCGGT 48532257 Query 1443 TTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGACCAACAAGG 1502 | || || ||||| ||||||||| | || |||||||||||||| |||||||||| ||||| Sbjct 48532256 TCAACGATTGTGTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAGATGACCACCAAGG 48532197 Query 1503 TGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAGGTGCGGGTCGATCAGAAATGTA 1562 | || || || ||||||||||||||||| || ||||| || ||| | || || || | Sbjct 48532196 TCGTAGAGTCAGCCAAGGCCATCCTGGGCAGCAGCAAGGTACGTGTCAACCAAAAGTGCA 48532137 Query 1563 AATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAACTTCCAATACAAACATGTGTG 1622 | || || | || || || | || || ||||| || || ||||| || |||||||| | Sbjct 48532136 AGTCATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAACACCAACATGTGCG 48532077 Query 1623 TGGTGGTGGATGGGAATTCCACGACCTTTGAACACCAGCAGCCGCTGGAGGACCGCATGT 1682 ||||| | || ||||| | | |||||||| || ||||||||| | ||||||| |||| Sbjct 48532076 TGGTGATTGACGGGAACAGCGCCACCTTTGAGCATCAGCAGCCGTTACAGGACCGGATGT 48532017 Query 1683 TCAAATTTGAACTGAC 1698 |||| |||||||| || Sbjct 48532016 TCAAGTTTGAACTCAC 48532001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14732203833670