Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq3 358 2e-95 seq11 316 6e-83 >seq3 Length=181338541 Score = 358 bits (396), Expect = 2e-95 Identities = 485/673 (72%), Gaps = 11/673 (2%) Strand=Plus/Plus Query 1063 CTGACCAAGACGGCGGAGGACTACCTCGTCGGAAAAGAACCCGTCTCGGACGACGAGATT 1122 |||||||| ||||| ||||||||| || || | | || || ||| ||| ||| Sbjct 14453730 CTGACCAAAACGGCTCCGGACTACCTGGTTGGGCAGCAGCCGGT---GGAGGAC---ATT 14453783 Query 1123 CGTCAGAACCGCATCTACAAGATTTTGGAACTGAACCACTACGACCCAGCGTACGTGGGG 1182 || | |||||||| ||| ||| || || ||||| |||||||| ||| | || Sbjct 14453784 CGGGACAACCGCATTTACCGGATCTTACAAATGAACGGGTACGACCCCCAGTAGGCGGCC 14453843 Query 1183 AGTATTTTGGTCGGGTGGTGCCAGAAGAAATGGGGCAAGCGAAACACGCTGTGGCTGTTC 1242 | || | || ||| ||||| || | || ||||| ||||| | |||||||| Sbjct 14453844 TCCGTGTTCCTGGGCTGGGCTCAGAAAAAGTTCGGTAAGCGGAACACCATCTGGCTGTTT 14453903 Query 1243 GGACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTC 1302 || || || |||||||||||||||||||||| ||| || ||||||||||| ||||| ||| Sbjct 14453904 GGGCCCGCCACCACCGGCAAGACCAACATCGTGGAAGCCATTGCCCATGCGGTGCCCTTC 14453963 Query 1303 TATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATG 1362 || || | || ||||||||||| |||||||||||||||||| | |||||||| |||||| Sbjct 14453964 TACGGCTATGTGAACTGGACCAATGAGAACTTTCCGTTCAACAATTGCGTCGACAAGATG 14454023 Query 1363 ATTATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATT 1422 | ||||||||||| |||||||| |||||||||||||| ||||| |||| || || || Sbjct 14454024 GTGATCTGGTGGGAGGAGGGCAAGATGACCGCCAAGGTCGTGGAGTCGGCCAAGGCCATC 14454083 Query 1423 CTGGGAGGATCTCGGGTGAGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCG 1482 ||||| || ||| | ||||||||||| ||||| | |||| | |||||| || Sbjct 14454084 CTGGGCGGCAGCAAGGTACGTGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCC 14454143 Query 1483 ACGCCGGTCATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGACT 1542 || || ||||| | || |||||||||||||| || || |||||||||| || Sbjct 14454144 ACCCCCGTCATCGTGACGTCCAACACCAACATGTGCGCGGTGATTGACGGGAACAGCACC 14454203 Query 1543 ACGTTCGAGCATAAGCAGCCGTTGGAGGACAGGATGTTTAAGCTCGAGCTGTTGACTCGT 1602 || || || || ||||||||||| | ||| ||||||| ||| | || || ||| Sbjct 14454204 ACTTTTGAACACCAGCAGCCGTTGCAAGACCGGATGTTCAAGTTTGAACTTACCCACCGT 14454263 Query 1603 TTACCCGATGACTTTGGTAAGGTGACCAAACAGGAGGTGCGTCAATTCTTCAGGTGGTCC 1662 | | |||||||| ||||| | ||||||||| || | |||||| ||||| || Sbjct 14454264 CTGGATCACGACTTTGGCAAGGTCAGCAAACAGGAAGTCAAAGACTTCTTCCGGTGGGCC 14454323 Query 1663 CAGGATCACCTGACCCCTGTGATCCCAGAATTCCTGGTGCGGAA-GGCGGAGTCTCGCAA 1721 || |||||| |||| |||| | ||||| || | || |||||||| || Sbjct 14454324 CAAGATCACATGACTGAAGTGACGCATGAATTTTACGTCAGAAAGGGCGGAGT----TAA 14454379 Query 1722 AAGACCCGCCCCC 1734 ||||| ||||||| Sbjct 14454380 AAGACACGCCCCC 14454392 Score = 154 bits (170), Expect = 4e-34 Identities = 204/283 (72%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 2395 AGGACGATTCGAGAGGTCTCGTGTTCCCGGGTTACAAGTATCTAGGCCCTTTCAACGGTC 2454 ||||| | || | ||||| ||| | || || |||||||| || || || ||||| || | Sbjct 14454899 AGGACAACTCTCGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAATGGAC 14454958 Query 2455 TAGATAAAGGAAAACCCGTCAACGAGGCAGACGCTGCCGCCTTAGAGCACGACAAGGCTT 2514 | || || ||| | || ||||||||||||||||| || ||| | | |||||||||||| | Sbjct 14454959 TCGACAAGGGAGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGCGCACGACAAGGCCT 14455018 Query 2515 ACGACCTCGAACTCAAGGACGGGCACAACCCGTACTTTGAGTACAACGAGGCCGATAGAC 2574 |||||| | ||| || ||| ||||||||||| | |||||||| | ||||| Sbjct 14455019 ACGACCAGCAGCTCCAGTCAGGGGACAACCCGTACCTCAAGTACAACCACGCCGACGCTG 14455078 Query 2575 GTTTCCAGGAACGTCTCAAAGACGATACCTCTTTCGGAGGGAATCTCGGTAAAGCCATCT 2634 |||||| | || | | | ||||| ||||| || || || || || ||| | | Sbjct 14455079 AGTTCCAGCAGCGCTTGGAGCAAGATACGTCTTTTGGGGGCAACCTTGGGCGAGCGGTAT 14455138 Query 2635 TTCAGGCCAAAAAGAGGGTCCTCGAGCCCTTTGGTCTGATTGA 2677 |||||||| || ||||| ||| | || ||||||||| |||| Sbjct 14455139 GCCAGGCCAAGAAAAGGGTTCTCAAACCTTTTGGTCTGGTTGA 14455181 >seq11 Length=132960392 Score = 316 bits (350), Expect = 6e-83 Identities = 391/531 (74%), Gaps = 8/531 (2%) Strand=Plus/Minus Query 1063 CTGACCAAGACGGCGGAGGACTACCTCGTCGGAAAAGAACCCGTCTCGGACGACGAGATT 1122 ||||| || ||||| |||||||| | ||| | | ||||| ||| ||| ||| Sbjct 48532527 CTGACAAAAACGGCTCCAGACTACCTGATTGGACAGCAGCCCGT---GGAGGAC---ATT 48532474 Query 1123 CGTCAGAACCGCATCTACAAGATTTTGGAACTGAACCACTACGACCCAGCGTACGTGGGG 1182 ||||||||||| ||| |||||| || ||||| ||| ||||| | ||||| || Sbjct 48532473 GAGCAGAACCGCATTTACTGGATTTTACAAATGAACGGCTATGACCCCGAGTACGCGGCC 48532414 Query 1183 AGTATTTTGGTCGGGTGGTGCCAGAAGAAATGGGGCAAGCGAAACACGCTGTGGCTGTTC 1242 | || | || ||| |||||||||| || ||||| || || | |||||||| Sbjct 48532413 TCCGTCTTTCTGGGCTGGGCTCAGAAGAAATTTGGGAAGCGGAATACCATCTGGCTGTTT 48532354 Query 1243 GGACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTC 1302 || ||||| ||||| |||||||||||||| ||||| || |||||||| || ||||| || Sbjct 48532353 GGGCCTGCTACCACGGGCAAGACCAACATTGCGGAAGCCATTGCCCACGCGGTGCCCTTT 48532294 Query 1303 TATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATG 1362 || || ||||| |||||||| || |||||||||| ||||||||| || ||||| || ||| Sbjct 48532293 TACGGCTGCGTGAACTGGACTAATGAGAACTTTCGGTTCAACGATTGTGTCGACAAAATG 48532234 Query 1363 ATTATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATT 1422 | ||||||||||| |||||||| |||||| ||||||| || || | || || || || Sbjct 48532233 GTGATCTGGTGGGAGGAGGGCAAGATGACCACCAAGGTCGTAGAGTCAGCCAAGGCCATC 48532174 Query 1423 CTGGG-AGGATCTCGGGTGAGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACC 1481 ||||| || | | ||| | || ||||||| ||||| | |||| | |||||| || Sbjct 48532173 CTGGGCAGCAGC-AAGGTACGTGTCAACCAAAAGTGCAAGTCATCGGCCCAGATCGACCC 48532115 Query 1482 GACGCCGGTCATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGAC 1541 ||||| ||||| | || |||||||||||||| || || |||||||||| | Sbjct 48532114 CACGCCCGTCATCGTGACGTCCAACACCAACATGTGCGTGGTGATTGACGGGAACAGCGC 48532055 Query 1542 TACGTTCGAGCATAAGCAGCCGTTGGAGGACAGGATGTTTAAGCTCGAGCT 1592 || || |||||| |||||||||| ||||| ||||||| ||| | || || Sbjct 48532054 CACCTTTGAGCATCAGCAGCCGTTACAGGACCGGATGTTCAAGTTTGAACT 48532004 Score = 95.1 bits (104), Expect = 4e-16 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 663 CGGGGGCGCGAACAAGGTCCGGGCCGAGTCGTATATTCCCGCCTACCTGATTCCGAAACA 722 ||| |||| ||||||||| || ||||| ||||||||| ||||||| | || ||| Sbjct 48532930 CGGTGGCGGGAACAAGGTGGTGGACGAGTGCTATATTCCCAACTACCTGCTCCCCAAAAC 48532871 Query 723 GCAACCGGAAGTGCAGTGGGCGTGGACTAACGTGCCCGAGTATATAA 769 ||||||||| | |||||||||||||||||| || |||||||||| Sbjct 48532870 CCAACCGGAACTTCAGTGGGCGTGGACTAACATGGAGGAGTATATAA 48532824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14860115306070