Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq3 416 8e-113 seq11 363 4e-97 >seq3 Length=181338541 Score = 416 bits (460), Expect = 8e-113 Identities = 541/753 (72%), Gaps = 8/753 (1%) Strand=Plus/Plus Query 848 TACATGGCGCTCGTCAGGTGGCTCGTGGACAACGGCATCGCGACCGAGCGCGAGTGGATG 907 ||||||| ||| ||| |||||||| ||||||| |||||| || | || | ||||| Sbjct 14453574 TACATGGAGCTAGTCGGGTGGCTCATGGACAAAGGCATCACGTCAGAAAAGCAATGGATC 14453633 Query 908 CGCGAGGACTCGGACGGGTACCTGAGCTACAACGCCACGGGCGCCA----CGCGCGCCCA 963 | |||||| || | ||| | || |||||| |||| || |||| | || Sbjct 14453634 CAGGAGGACCAGGCCTCCTACATTTCCTTCAACGC----GGCGTCAAATTCGCGGTCACA 14453689 Query 964 GATCAAGGCCGCGCTCGACAACGCGGCCCGCATCATGGTCAACACGAAGACGGCCGCCGA 1023 || || || || || ||||| || | | |||||| | || || ||||| | || Sbjct 14453690 AATTAAAGCGGCCCTGGACAATGCCGGCAAAATCATGAGCCTGACCAAAACGGCTCCGGA 14453749 Query 1024 CTACCTGGTCGGCAGGAACCCGCCCCTCGACGTGGAGGACAACAGGATCTACCGGCTGTT 1083 ||||||||| || | | ||| ||| | ||||||| | || |||||| | || Sbjct 14453750 CTACCTGGTTGGGCAGCAGCCGGTGGAGGACATTCGGGACAACCGCATTTACCGGATCTT 14453809 Query 1084 TCGCATGAACGGCTACGACCCCGCCTACGCGGGCAGCGTGCTGCTCGGCTGGTGCCGCAC 1143 | |||||||| ||||||||| || |||| | |||| | || |||||| | | Sbjct 14453810 ACAAATGAACGGGTACGACCCCCAGTAGGCGGCCTCCGTGTTCCTGGGCTGGGCTCAGAA 14453869 Query 1144 CGGCTTCGGCAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACGAA 1203 ||||| ||||| |||||| ||||||| || ||||| ||||| ||||||||||| || Sbjct 14453870 AAAGTTCGGTAAGCGGAACACCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAA 14453929 Query 1204 CCTCGCCGAGGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAACGA 1263 | ||| || ||||| ||| |||||||||||||||||| || ||||||||||| || Sbjct 14453930 CATCGTGGAAGCCATTGCCCATGCGGTGCCCTTCTACGGCTATGTGAACTGGACCAATGA 14453989 Query 1264 GAACTTCCCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAGAT 1323 |||||| || |||||| | ||||| ||||||||| | ||||||||||||||||||||||| Sbjct 14453990 GAACTTTCCGTTCAACAATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 14454049 Query 1324 GACGTCCAAGGTCGTCGAGAGCGCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGTCGA 1383 ||| |||||||||| ||| |||||||||||||| |||||||||||||| || || || Sbjct 14454050 GACCGCCAAGGTCGTGGAGTCGGCCAAGGCCATCCTGGGCGGCAGCAAGGTACGTGTGGA 14454109 Query 1384 CCAGAAGTGCAAGAACTCGCAGCAGATCGAGCCCACGCCCGTCATNNNNNNNNNNNNNNN 1443 ||| ||||||||| ||| |||||||| ||||| |||||||| Sbjct 14454110 CCAAAAGTGCAAGTCATCGGCCCAGATCGACCCCACCCCCGTCATCGTGACGTCCAACAC 14454169 Query 1444 NNACATGTGCGAGGTCGTCGACGGGAACTCGACCACGTTCGAGCACCGGCAGCCGCTCGA 1503 ||||||||| ||| | ||||||||| ||||| || || |||| ||||||| | | Sbjct 14454170 CAACATGTGCGCGGTGATTGACGGGAACAGCACCACTTTTGAACACCAGCAGCCGTTGCA 14454229 Query 1504 GGACAGGATGTTCAAGTTCGAGCTCACCGTCAGGCTGCAGCCCACCTTCGGCAAGATCAC 1563 ||| ||||||||||||| || || ||| | | ||| | | | ||| |||||| ||| Sbjct 14454230 AGACCGGATGTTCAAGTTTGAACTTACCCACCGTCTGGATCACGACTTTGGCAAGGTCAG 14454289 Query 1564 CAAGCAGGAGGTGCGCGAGTTCTTTAAGTGGGC 1596 ||| ||||| || || ||||| |||||| Sbjct 14454290 CAAACAGGAAGTCAAAGACTTCTTCCGGTGGGC 14454322 Score = 172 bits (190), Expect = 1e-39 Identities = 215/292 (74%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 2162 ACCAGGACCGCGCGCGCGGCCTCGTCGTCCCCGGCTACAAGTACCTCGGGCCCTTCAACG 2221 |||||||| | | || || || || | || || |||||||||||||| |||||||| | Sbjct 14454896 ACCAGGACAACTCTCGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAATG 14454955 Query 2222 GACTCGACAGGGGCGAGCCCGTCAACGCGGCCGACGCGGCGGCCAAGAAGCACGACGAGG 2281 ||||||||| ||| ||||| ||||||| ||| ||||| |||||| ||||||| ||| Sbjct 14454956 GACTCGACAAGGGAGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGCGCACGACAAGG 14455015 Query 2282 AGTACGACCGGCTCCTCAAGGCGGGGGACAACCCGTACCTCGCCTACAACCACGCGGACG 2341 ||||||| || ||| || | |||||||||||||||||| ||||||||||| |||| Sbjct 14455016 CCTACGACCAGCAGCTCCAGTCAGGGGACAACCCGTACCTCAAGTACAACCACGCCGACG 14455075 Query 2342 CCGAGTTCCAGAAGGACCT-CAGCGGCGACTCCAGCCTAGCCGGCAACGCCGCGAACGCG 2400 | ||||||||| || | | ||| || | | | |||||| | | ||| Sbjct 14455076 CTGAGTTCCAGCAGCGCTTGGAGC-AAGATACGTCTTTTGGGGGCAACCTTGGGCGAGCG 14455134 Query 2401 CTCTTCCAGGCCAAGAAGAGGGTCCTCGAGCCCTTCGGACTGGTCGAGGGAG 2452 | | |||||||||||| ||||| ||| | || || || ||||| |||| || Sbjct 14455135 GTATGCCAGGCCAAGAAAAGGGTTCTCAAACCTTTTGGTCTGGTTGAGGAAG 14455186 >seq11 Length=132960392 Score = 363 bits (402), Expect = 4e-97 Identities = 493/690 (71%), Gaps = 10/690 (1%) Strand=Plus/Minus Query 847 ATACATGGCGCTCGTCAGGTGGCTCGTGGACAACGGCATCGCGACCGAGCGCGAGTGGAT 906 |||||||| ||| ||| |||||||||||||||| || ||| || | || | ||||| Sbjct 48532684 ATACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATCACGTCAGAAAAGCAATGGAT 48532625 Query 907 GCGCGAGGACTCGGACGGGTACCTGAGCTACAACGCCACGGGCGCCA----CGCGCGCCC 962 | |||||| || ||| | || |||| || | | || | || | | Sbjct 48532624 CCAGGAGGACCAGGCTTCCTACATCTCCTTCAACACC----GTGTCAAATTCCCGGTCTC 48532569 Query 963 AGATCAAGGCCGCGCTCGACAACGCGGCCCGCATCATGGTCAACACGAAGACGGCCGCCG 1022 |||| |||||||| | ||||| || | || ||| | || || ||||| | | Sbjct 48532568 AGATTAAGGCCGCTTTGGACAATGCCTCTAAAATTATGAGCCTGACAAAAACGGCTCCAG 48532509 Query 1023 ACTACCTGGTCGG-CAGGAACCCGCCCCTCGACGTGGAGGACAACAGGATCTACCGGCTG 1081 |||||||| | || ||| | |||| ||| | ||| | ||| | || ||| || | Sbjct 48532508 ACTACCTGATTGGACAGCAGCCCGTGGAG-GACATTGAGCAGAACCGCATTTACTGGATT 48532450 Query 1082 TTTCGCATGAACGGCTACGACCCCGCCTACGCGGGCAGCGTGCTGCTCGGCTGGTGCCGC 1141 || | ||||||||||| ||||||| ||||||| | ||| | || |||||| | Sbjct 48532449 TTACAAATGAACGGCTATGACCCCGAGTACGCGGCCTCCGTCTTTCTGGGCTGGGCTCAG 48532390 Query 1142 ACCGGCTTCGGCAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACG 1201 | || || ||||| || ||| ||||||| || ||||| || || || |||||||| Sbjct 48532389 AAGAAATTTGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACC 48532330 Query 1202 AACCTCGCCGAGGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAAC 1261 ||| | || || ||||| |||| |||||||||| ||||||||||| |||||||| || Sbjct 48532329 AACATTGCGGAAGCCATTGCCCACGCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAAT 48532270 Query 1262 GAGAACTTCCCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAG 1321 |||||||| | |||||||| || || ||||| ||| | ||||||||||||||||||||| Sbjct 48532269 GAGAACTTTCGGTTCAACGATTGTGTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAAG 48532210 Query 1322 ATGACGTCCAAGGTCGTCGAGAGCGCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGTC 1381 ||||| |||||||||| ||| |||||||||||||| ||| |||||||||| || ||| Sbjct 48532209 ATGACCACCAAGGTCGTAGAGTCAGCCAAGGCCATCCTGGGCAGCAGCAAGGTACGTGTC 48532150 Query 1382 GACCAGAAGTGCAAGAACTCGCAGCAGATCGAGCCCACGCCCGTCATNNNNNNNNNNNNN 1441 |||| ||||||||| ||| |||||||| |||||||||||||| Sbjct 48532149 AACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCCACGCCCGTCATCGTGACGTCCAAC 48532090 Query 1442 NNNNACATGTGCGAGGTCGTCGACGGGAACTCGACCACGTTCGAGCACCGGCAGCCGCTC 1501 ||||||||| ||| | ||||||||| |||| || ||||| | ||||||| | Sbjct 48532089 ACCAACATGTGCGTGGTGATTGACGGGAACAGCGCCACCTTTGAGCATCAGCAGCCGTTA 48532030 Query 1502 GAGGACAGGATGTTCAAGTTCGAGCTCACC 1531 ||||| ||||||||||||| || |||||| Sbjct 48532029 CAGGACCGGATGTTCAAGTTTGAACTCACC 48532000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13593791729310