Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papio_20anubis_20[genbank_20GCA_5F000264685.2_202017-04-20] 63,234 sequences; 2,959,356,508 total letters Query= NC_027429.1 Length=4590 Score E Sequences producing significant alignments: (Bits) Value seq3 150 5e-33 seq11 98.7 3e-17 >seq3 Length=181338541 Score = 150 bits (166), Expect = 5e-33 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 2212 CGCGGTCTAGTGGTTCCAGGTTATAAATACCTCGGTCCATTCAACGGATTAGACAAGGGC 2271 || ||||| ||| |||| || || || |||||||| || ||||| ||| | |||||||| Sbjct 14454910 CGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAATGGACTCGACAAGGGA 14454969 Query 2272 GAGCCTGTCAACGCAGCTGACGCGGCTGCCCTTGAACACGACAAAGCTTATAACGAGCTT 2331 ||||| ||||||| || ||||| || ||||| | |||||||| || || || ||| Sbjct 14454970 GAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGCGCACGACAAGGCCTACGACCAGCAG 14455029 Query 2332 CTCGAGGCTGGAGACAACCCGTACATCAAGTACAACCACGCGGACGCCGTCTTTCAAGAA 2391 ||| || | || |||||||||||| |||||||||||||||| ||||| | || || | Sbjct 14455030 CTCCAGTCAGGGGACAACCCGTACCTCAAGTACAACCACGCCGACGCTGAGTTCCAGCAG 14455089 Query 2392 CGCTTGCAAGGAGATACTAGTTTGGGTGGTAAC 2424 |||||| | |||||| ||| || || ||| Sbjct 14455090 CGCTTGGAGCAAGATACGTCTTTTGGGGGCAAC 14455122 Score = 82.4 bits (90), Expect = 2e-12 Identities = 224/341 (66%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 1336 CGGAAAAAGGAATACCATCTGGCTCTACGGACCAGCTACCACCGGAAAGACTATTATAGC 1395 ||| || |||| ||||||||||| | || || || |||||||| ||||| | || | Sbjct 14453876 CGGTAAGCGGAACACCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACATCGT 14453935 Query 1396 GCAAGCTATAGCCCA--CGGTGCTGTCCTCTTTGGAGGAGTCAATTGGACTAATGAAAAC 1453 | |||| || ||||| |||||| | ||| || || || ||||| ||||| ||| Sbjct 14453936 GGAAGCCATTGCCCATGCGGTGC--CCTTCTACGGCTATGTGAACTGGACCAATGAGAAC 14453993 Query 1454 TTTCCCTTTTGTAATTGTCCTGGTAAACTGTTGATATGGTGGGAAGAGGGTAAAATGACA 1513 ||||| || ||||| | || || |||| |||||||| ||||| || ||||| Sbjct 14453994 TTTCCGTTCAACAATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACC 14454053 Query 1514 CAAAAGATGGTCGAAACCGCCAAATGTATATTAGGCGGTGCTGTTGTACCTGTGGATATC 1573 ||| | || || | ||||| || | ||||| |||| |||||| Sbjct 14454054 GCCAAGGTCGTGGAGTCGGCCAAGGCCATCCTGGGCGGCAGCAAGGTACGTGTGGACCAA 14454113 Query 1574 AAAGGCAAAATGGCTGAACTGTGTGAAACCACCCCTGTCATTATTACCAGTAATACCAAC 1633 || |||| | | | | || ||||||| ||||| | || || |||||| Sbjct 14454114 AAGTGCAAGTCATCGGCCCAGATCGACCCCACCCCCGTCATCGTGACGTCCAACACCAAC 14454173 Query 1634 ATGTGTCAGGTCTTTGATGGTAACAGTAGCAGTTTTGAACA 1674 ||||| ||| |||| || ||||| | || ||||||||| Sbjct 14454174 ATGTGCGCGGTGATTGACGGGAACAGCACCACTTTTGAACA 14454214 >seq11 Length=132960392 Score = 98.7 bits (108), Expect = 3e-17 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 1328 AAGGAATACGGAAAAAGGAATACCATCTGGCTCTACGGACCAGCTACCACCGGAAAGACT 1387 ||| ||| || || |||||||||||||||| | || || |||||||| || ||||| Sbjct 48532389 AAGAAATTTGGGAAGCGGAATACCATCTGGCTGTTTGGGCCTGCTACCACGGGCAAGACC 48532330 Query 1388 ATTATAGCGCAAGCTATAGCCCACGGTGCTGTCCTCTT-TGGAGGAGTCAATTGGACTAA 1446 | || ||| |||| || |||||| | | || ||| || || | || || |||||||| Sbjct 48532329 AACATTGCGGAAGCCATTGCCCAC-GCGGTGCCCTTTTACGGCTGCGTGAACTGGACTAA 48532271 Query 1447 TGAAAACTTTCCCTTTTGTAATTGTCCTGGTAAACTGTTGATATGGTGGGAAGAGGGTAA 1506 ||| ||||||| || ||||| | ||| || |||| |||||||| ||||| || Sbjct 48532270 TGAGAACTTTCGGTTCAACGATTGTGTCGACAAAATGGTGATCTGGTGGGAGGAGGGCAA 48532211 Query 1507 AATGAC 1512 ||||| Sbjct 48532210 GATGAC 48532205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14565918919550