Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_026662.1 Length=3907 Score E Sequences producing significant alignments: (Bits) Value seq41813 150 4e-33 >seq41813 Length=660 Score = 150 bits (166), Expect = 4e-33 Identities = 355/520 (68%), Gaps = 16/520 (3%) Strand=Plus/Minus Query 2058 CCCCTCTGGCTAGCCCTCTATGGGTACGAGTCCTACTGCACCAAATTCCTCAATGACGAA 2117 ||||| |||||||||||||| || ||| | ||| | ||| ||||||| |||||| Sbjct 572 CCCCTGTGGCTAGCCCTCTACGGCTACTACACCTGGGCCCAAAAACTCCTCAACGACGAA 513 Query 2118 CAAGTCATGTACAACTACGTGCTCTGCGTGCGCTGCACTTACACCTGGCCTCGCATGTAC 2177 ||| | |||||| | ||| || ||| | ||||||||||| | || Sbjct 512 TCCGTCGGCTTTAACTACCTCCTCATAGTCATCTGTCCCTACACCTGGCCCAAACTCCAC 453 Query 2178 CGCACGGGCAACCCAAACCAGTGTGACATCCCCCTAGGCAACAGTTTCCTTGAAGGCAAC 2237 | | | ||||||| |||||| | ||| || | | | | | ||| | ||| || Sbjct 452 CACCAGAGCAACCCCAACCAGGGAGACGTCATCATCGACCCCTCTTTTCAAAGAGG--AC 395 Query 2238 ATGCCAGGAGGGG--CCTACCCGCC-CCCCTTACTCATGAGAACCAAATGGTACCCCTGC 2294 | | || || ||| ||| || ||||| || |||| | ||| ||||||||| Sbjct 394 AGGTGTGGGGGTCTCCCTTCCCCCCGCCCCTCAC-CATGCGCCTCAAGTGGTACCCCATG 336 Query 2295 CTCCTCCACCAGAGAGAGTTTATCAACGCAGTAGTAGGCAGCGGGCCC-TTCATGCCCAG 2353 ||| ||||||| | ||| | |||||||| ||||| | ||||||| ||||||||| | Sbjct 335 CTCTTCCACCAACGTGAGGTCATCAACGCCATAGTAACCT-CGGGCCCGTTCATGCCCCG 277 Query 2354 AGGCTACTCAGTCAAGAGCTGGGAACTCACGGCGGGCTACAAATTTAGATTCTCCTGGGG 2413 || |||| | | | | | | |||| | || |||||||| | |||| |||||| Sbjct 276 AGCCTACCCGGGCCGCACTTTCTCAGTCACTACAGGTTACAAATTCAAATTCCTCTGGGG 217 Query 2414 CGGTCACGCCCCCTACACAAA-ACAGGTCGACGACCCCTGCAAGAAAGGCACCCATGCCC 2472 ||| | || || |||| | ||||||||||||||| ||| | ||||||||||| || Sbjct 216 GGGTAATACCGCC-ACACCCACACAGGTCGACGACCCGTGCGAAAAAGGCACCCACCTCC 158 Query 2473 TTCCC-GATCCCGATA-GACAACGCATGGCAGTACAAGTCGAGGACCCGGGGCGACTGGA 2530 ||||| || |||| | || ||| |||||||||||| ||||||||| ||||| Sbjct 157 TTCCCGGACCCCGTGACCTCACTGCA--CCAGTACAAGTCGTCGACCCGGGGAAACTGGT 100 Query 2531 TCCCCAGTACATGTTCCACGGGTGGGATCAG-CGACGAGG 2569 |||||| || ||||||| ||||| ||| ||||| || Sbjct 99 ACCCCAGCTCACGTTCCACACATGGGA-CAGACGACGTGG 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12372035413760