Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_026765.1
Length=3621
Score E
Sequences producing significant alignments: (Bits) Value
seq34571 87.8 4e-14
>seq34571
Length=2950
Score = 87.8 bits (96), Expect = 4e-14
Identities = 218/327 (67%), Gaps = 8/327 (2%)
Strand=Plus/Minus
Query 1063 CCCTGTACGATGAGTACATGAGACTGAGAAACTGGTGGTCCCGCTCCAACACCCACTTAG 1122
|||| |||| || || | ||||| | ||| ||||||| ||| |||| |||| |||
Sbjct 2190 CCCTCTACGGAGAACACCTCCGACTGCGCAACCGGTGGTCGCGCAGCAACTGCCACCTAG 2131
Query 1123 ACCTAGTCAGATACACGGGAGTCTCCTTCAGACTCTACAGGCACACACACCGAGACTACA 1182
|||||||| | ||| || | ||| | | || | ||| | || ||||||||
Sbjct 2130 ACCTAGTCCGCTACCTCGGCTGCCGCTTTAAATGGTATCGCCACCCCGACAAAGACTACA 2071
Query 1183 TAGTCAGCTACAGCCTAGAGACCCCCATGGAAAGCAGCATAGCCACCCACATGTCCCTGC 1242
|||| | |||| |||||| |||||||||| | || | ||||| ||||| | |
Sbjct 2070 TAGTTACCTACTCCCTAGAAACCCCCATGGTAGCCACACAAACCACCTACATGAGCTGCC 2011
Query 1243 ACCC-CATGCGCCAACTGTTCCAAAGCAAACACCGCACCGTACCCTCCTTCTACACCAAA 1301
|||| || | || || || | |||||||| ||| ||| | | |||||||
Sbjct 2010 ACCCTCAAAC-TCAGCTCCTCAACCGCAAACACATATTCGTTCCCAGCCTGGCCACCAAA 1952
Query 1302 CCCGGGGGCAAACCCTACA---TCACACTCAAAGCCAGACCCCCTCGCCTCATGAAAACC 1358
||| |||| |||||||| ||| | || || ||||||| |||||| | |
Sbjct 1951 CCCCGGGGACGACCCTACAAATACACCCGCATAG---GACCCCCCAAACTCATGCGCAAC 1895
Query 1359 CAGTGGTACTTTCAACACGATTTTTGC 1385
||||||||||| ||| || ||||||
Sbjct 1894 CAGTGGTACTTCCAATCAGACTTTTGC 1868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 11458191888880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |