Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= NC_001539.1 Length=5323 Score E Sequences producing significant alignments: (Bits) Value seq560 829 0.0 >seq560 Length=1076375 Score = 829 bits (918), Expect = 0.0 Identities = 1134/1572 (72%), Gaps = 20/1572 (1%) Strand=Plus/Minus Query 281 AACCAGTATACTGAGGAAGTTATGGAGGGAGTAAATTGGTTAAAGAAACATGCAGAAAAT 340 |||| || ||||||||||| |||| ||| || ||| |||| | || ||||| Sbjct 41172 AACCGATACACTGAGGAAGTCCTGGACACAGTCAACTGGCTAAAAGACCACCAGGAAAAA 41113 Query 341 GAAGCATTTTCGTTTGTTTTTAAATGTGACAACGTCCAACTAAATGGAAAGGATGTTCGC 400 |||||||| ||||||||||||||| ||| || || |||||||| || ||| Sbjct 41112 GAAGCATTCTCGTTTGTTTTTAAAACTGAGAATGTACAACTAAACCACAAATGTGTGACT 41053 Query 401 TGGAACAACTATACCAAACCAATTCAAAATGAAGAACTAACATCTTTAATTAGAGGAGCA 460 | ||| ||||| |||| || | ||||| | | | | | |||||| | Sbjct 41052 TCGAAAAACTACGGCAAATATCCGCAGGACGAAGAGATGAGAAACCTGGTAAGAGGAACC 40993 Query 461 CAAACAGCAATGGATCAAACCGAAGAAGAAGAAATGGACTGGGAATCGGAAGTTGATAGT 520 |||| ||| ||||| | || ||||| ||||| |||||||| || | ||| Sbjct 40992 GAAACGGCACTGGAT------GCAGCTGAAGATATGGAATGGGAATCAGACATGGATGAA 40939 Query 521 CTCGCCAAAAAGCAAGTACAAACTTTTGATGCATTAATTAAAAAATGTCTTTTTGAAGTC 580 || |||| || |||| ||||||||||||| | |||||||||||||||||||||| Sbjct 40938 ATCTGCAAACAGTCAGTAACAACTTTTGATGCAATTGTTAAAAAATGTCTTTTTGAAGTA 40879 Query 581 TTTGTTTCTAAAAATATAGAACCAAATGAATGTGTTTGGTTTATTCAACATGAATGGGGA 640 || | ||| || | || ||||| || ||| ||||||||||| |||||| || Sbjct 40878 ATTTTAAACAAACATGTTGATCCAAAAGACTGTTACTGGTTTATTCAGCATGAACATGGC 40819 Query 641 AAAGATCAAGGCTGGCATTGTCATGTTTTACTTCATAGTAAGAACTTACAACAAGCAACT 700 ||||| | || ||||||||||| ||||| | | || | | || ||| || | Sbjct 40818 AAAGACACTGCCTACCATTGTCATGTCTTACTAGGTGGAAAAACCCTAGTACAGGCTATG 40759 Query 701 GGTAAATGGCTACGCAGACAAATGAATATGTAT-TGGAGTAGATGGTTGGTGACTCTTTG 759 || |||||| | | | ||| | ||| | || ||||| |||| ||||| | | || Sbjct 40758 GGCAAATGGTTCAGAAAGCAACTAAAT-TCAATGTGGAGCAGATACTTGGTTGGTTTGTG 40700 Query 760 TTCGGTAAACTTAACACCAACTGAAAAGATTAAGCTCAGAGAAATTGCAGAAGATAGTGA 819 | || | || ||| ||| |||||||||||||||||| |||||||| | | Sbjct 40699 TGAAATAGTTCTGACTCCAGTTGAGCGGATTAAGCTCAGAGAAATAATAGAAGATAATCA 40640 Query 820 ATGGGTGACTATATTAACATACAGACATAAGCAAACaaaaaaaGACTATGTTAAAATGGT 879 ||||||| || |||| |||| || || || || | |||||| || || || Sbjct 40639 GTGGGTGAGCCTACTAACTTACACTCACAAACAGACCAGAAAAGAATACACCAAGCAAGT 40580 Query 880 TCATTTTGGAAATATGATAGCATATTACTTT-TTAACAAAGaaaaaaaTTG--TCCACA- 935 ||||| |||||||| || | ||| ||| |||||||| || ||||| || | | Sbjct 40579 AATGTTTGGCAATATGATTGCCTTTTATTTTCTTAACAAA-AATAAAATGCACTCTAAAG 40521 Query 936 TGACAAAAGAAAGTGGCTATTTTTTAAGTACTGATTCTGGTTGGAAATTTAACTTTATGA 995 || |||||| ||| || | | | || |||||| |||||||||| ||| | |||| Sbjct 40520 TGCGAAAAGA---TGGTTACTATCTCAGCACTGATCATGGTTGGAAAACCAACATGATGA 40464 Query 996 AGTATCAAGACAGACAAATTGTCAGCACACTTTACACTGAACAAATGAAACCAGAAACCG 1055 | | | ||||| || | || | || ||| |||||||| | || || ||||| | Sbjct 40463 AAGAAAAGGACAGGCAGCTAGTTGCTAAGCTGTACGCTGAACAAGTTAAGCCGGAAACGG 40404 Query 1056 TTGAAACCACAGTGACGACAGCACAGGAAACAAAGCGCGGGAGAATTCAAACTAAAAAGG 1115 ||||||||||||| || || || || ||| ||||||||| ||||||||||||||||| | Sbjct 40403 TTGAAACCACAGTAACAACTGCTCAAGAACAAAAGCGCGGCAGAATTCAAACTAAAAAAG 40344 Query 1116 AAGTGTCAATCAAA-TG-TACTTTGCGGGACTTGGTTAGTAAAAGAGTAACATCACCTGA 1173 | ||||| || ||| || | || || | || |||| | ||||| || ||||| || Sbjct 40343 AGGTGTCTATTAAAGTGATGCTATGTG--ACCTGGTAAACCCCAGAGTCACGTCACCAGA 40286 Query 1174 AGACTGGATGATGTTACAACCAGATAGTTATATTGAAATGATGGCACAACCAGGAGGTGA 1233 ||||||||||||| | || |||||||||||||| ||||||||||| ||||||| ||||| Sbjct 40285 AGACTGGATGATGCTGCAGCCAGATAGTTATATAGAAATGATGGCTTAACCAGGCGGTGA 40226 Query 1234 AAATCTTTTAAAAAATACACTTGAAATTTGTACTTTGACTTTAGCAAGAACAAAAACAGC 1293 ||||||||| |||| ||| | |||||||||||| | ||||| || |||||||||| || Sbjct 40225 AAATCTTTTGGAAAACACATTAGAAATTTGTACTCTAACTTTGGCTTGAACAAAAACTGC 40166 Query 1294 ATTTGAATTAATACTTGAAAAAGCAGATAATACTAAACTAACTAACTTTGATCTTGCAAA 1353 |||||| ||||| ||||||||||| | | |||| || |||| || || || | Sbjct 40165 ATTTGATTTAATCACTGAAAAAGCAGCACAAAAAGAACTTACCAACTATGTGCTGGCCGA 40106 Query 1354 TTCTAGAACATGTCAAATTTTTAGAATGCACGGATGGAATTGGATTAAAGTTTGTCACGC 1413 || | ||| | |||| || | | | || | ||||| | ||| |||| | || || Sbjct 40105 GTCATGCACAGCTAAAATCTTCAAACTACATGACTGGAACTACATTGAAGTATTACATGC 40046 Query 1414 TATAGCATGTGTTTTAAATAGACAAGGTGGTAAAAGAAATACAGTTCTTTTTCATGGACC 1473 ||| |||||| |||| |||| ||| | ||| | || ||| |||| || |||||||| Sbjct 40045 TATGATCTGTGTTCTAAACAGACCAGGAGACAAACGGAACACAATTCTATTACATGGACC 39986 Query 1474 AGCAAGTACAGGAAAATCTATCATTGCTCAAGCCATAGCACAAGCTGTGGGTAATGTTGG 1533 || || || |||||| || ||||| |||| |||||| || | | ||||||||||| Sbjct 39985 TGCCAGCACTGGAAAAAGCATTATTGCACAAGTCATAGCTCAGTGTATTGGTAATGTTGG 39926 Query 1534 TTGTTATAATGCAGCAAATGTAAATTTTCCATTTAATGACTGTACCAATAAAAATTTAAT 1593 ||||| |||||||||||||| || ||||||||||||||||||||||| ||||| |||| Sbjct 39925 CTGTTACAATGCAGCAAATGTGAACTTTCCATTTAATGACTGTACCAACAAAAACCTAAT 39866 Query 1594 TTGGATTGAAGAAGCTGGTAACTTTGGTCAACAAGTTAATCAATTTAAAGCAATTTGTTC 1653 ||| | |||||||| || |||||| || | ||||| || ||||||||||| |||||||| Sbjct 39865 ATGGGTAGAAGAAGCGGGAAACTTTAGTAACCAAGTAAACCAATTTAAAGCTATTTGTTC 39806 Query 1654 TGGACAAACAATTAGAATTGATCAAAAAGGTAAAGGAAGTAAGCAAATTGAACCAACTCC 1713 || ||||| || |||||||| ||||||| ||||| || |||||||| ||||||||||| Sbjct 39805 AGGTCAAACTATAAGAATTGACTAAAAAGGCAAAGGCAGCAAGCAAATAGAACCAACTCC 39746 Query 1714 AGTAATTATGACAACTAATGAAAATATAACAATTGTGAGAATTGGATGTGAAGAAAGACC 1773 ||| || |||||||| |||||| | || || | || |||||||| |||||||||||||| Sbjct 39745 AGTTATAATGACAACCAATGAAGACATCACCAAAGTTAGAATTGGCTGTGAAGAAAGACC 39686 Query 1774 TGAACATACACAACCAATAAGAGACAGAATGTTGAACATTAAGTTAGTATGTAAGCTTCC 1833 ||||| || |||||||| ||||| |||||| | |||||| | | ||| || || Sbjct 39685 AGAACACACTCAACCAATCAGAGATAGAATGCTCAACATTCCTCTCACACATAAACTGCC 39626 Query 1834 AGGAGACTTTGG 1845 |||||||||||| Sbjct 39625 AGGAGACTTTGG 39614 Score = 327 bits (362), Expect = 4e-86 Identities = 1105/1685 (66%), Gaps = 62/1685 (4%) Strand=Plus/Minus Query 2897 GTGGGGATTTCTACGGGTACTTTCAATAATCAGACGGAATTTAAATTTTTGGAAAACGGA 2956 || ||| ||||||| |||| || ||||||||||| ||| || ||| | | | || | Sbjct 38366 GTTGGGGTTTCTACAGGTAGCTTTGATAATCAGACGACATTCAACTTTCTTGGAGACAGT 38307 Query 2957 TGGGTGGAAATCACAGCAAACTCAAGCAGACTTGTACATTTAAATATGCCAGAAAGTGAA 3016 |||||||||||| || | || |||||| || ||| |||| ||||||||| |||| Sbjct 38306 GTGGTGGAAATCACCGCGCATGCATCCAGACTCGTTCATCTAAACATGCCAGAATTTGAA 38247 Query 3017 AATTATAGAAGAGTGGTTGTAAATAATATGGATAAAACTGCAGTTAACGGAAACATGGCT 3076 | || |||| || ||| |||| || | | ||| | || || |||| Sbjct 38246 ACCTACTGAAGGGTCAGTGTGCTTAATTCAGA-AGCAGGACAGGCA--GGTAAGATGGTA 38190 Query 3077 TTAGATGATATTCATGCACAAATTGTAACACCTTGGTCATTGGTTGATGCAAATGCTTGG 3136 ||||||| || ||||||| || || || ||| || | ||||| ||||||||| Sbjct 38189 CAAGATGATGAACACACACAAATGGTTACTCCATGGAGCTTAATAGATGCTAATGCTTGG 38130 Query 3137 GGAGTTTGGTTTAATCCAGGAGATTGGCAACTAATTGTTAATACTATGAGTGAGTTGCAT 3196 || |||||||| | ||| || || ||||| |||||| || | |||| |||||| | Sbjct 38129 GGGGTTTGGTTCAGTCCTGGGGACTGGCAGCTAATTAACAACAACATGACAGAGTTGGAG 38070 Query 3197 TTAGTTAGTTTTGAACAAGAAATTTTTAATGTTGTTTTAAAGACTGTTTCAGAATCTGCT 3256 || ||||||||||| ||||| |||||||||| || |||| ||| | ||||| || Sbjct 38069 TTGGTTAGTTTTGAGCAAGAGCTTTTTAATGTAGTACTAAAAACTATCACAGAAAGTGGA 38010 Query 3257 ACTCAGCCACCAACTAAAGTTTATAATAATGATTTAACTGCATCATTGATGGTTGCATTA 3316 ||||| || || ||||| || || ||||| || ||||| ||||||| || || Sbjct 38009 ACTCAACCTGCAGTCAAAGTCTACAACAATGACTTGACTGCTAGCCTGATGGTAGCTCTA 37950 Query 3317 GATAGTAATAATACTATGCCATTTACTCCAGCAGCTATGAGATCTGAGACATTGGGTTTT 3376 || || || || || |||| | || ||||| || ||| || ||| | ||||| Sbjct 37949 GACAGCAACAACACACTGCCTTACACACCAGCTGCACCAAGACAAGAAACACTTGGTTTC 37890 Query 3377 TATCCATGGAAACCAACCATACCAACTCCATGGAGATATTATTTTCAATGGGATAGAACA 3436 |||| ||| ||||||| |||||||| | ||||| ||||| || ||||| Sbjct 37889 CATCCTTGGCTGCCAACCAAACCAACTCAGTACAGATACTATTTAAGCTGTACTAGAAAC 37830 Query 3437 TTAAT---ACCATCTCATACTGG---AACTAGTGGCACACC-AACAA-ATATATACCATG 3488 || | |||| || | || || ||| || || | | |||| || | | || Sbjct 37829 TTGACGCCACCAACTTACACAGGGCAAACAAGCACCATAACTAACACCATTGCTCCTATT 37770 Query 3489 G--TACAGATCCAGATGATGTTCAATTTTATACTATTGAAAATTCTGTGCCAGTACACTT 3546 | |||| | || ||||| ||| || | ||||| || || || || |||| Sbjct 37769 GATTACAAAGACACC--ATGTT-----TTACACAGTGGAAAACTCAGTACCTATATACTT 37717 Query 3547 ACTAAGAACAGGTGATGAATTTGCTACAGGAACAtttttttttGATTGTAAACCATGTAG 3606 || |||||||| || |||||| || ||||| | | ||||||||| || ||| | Sbjct 37716 GCTCAGAACAGGGGACGAATTTAGCACTGGAACTTACTATTTTGATTGCAATCCAATCAA 37657 Query 3607 ACTAACACATACATGGCAAACAAATAGAGCATTGGGCTTACCACCATTTCTAAATTCTTT 3666 | | ||||| ||||||||||||| || || | || ||||| ||| || | | || Sbjct 37656 AATGACACACACATGGCAAACAACAAGGTCACTTGGTTTACCTCCAAAGCTGCAAACATT 37597 Query 3667 GCCTCAATCTGAAGGAGCTACTAACTTTGGTGATATAGGAGTTCAACAAGATAAAAGACG 3726 ||| | ||||| | || | | || ||| ||| | || || ||||||| Sbjct 37596 ACCTACTACAGAAGGTGATAACCATTATGACTCTATTGGAACAGATCAGGACAAAAGACC 37537 Query 3727 TGGTGTAACTCAAATGGGAAATACAAACTATATTACTGAAGCTACTATTATGAGACCAGC 3786 || | ||||||| | |||| | | || |||||||| || | ||| |||||||| Sbjct 37536 AGGCATGACTCAAACTGTTAATAACAGC---ATAACTGAAGCAACCACTATTAGACCAGC 37480 Query 3787 TGAGGTTGGTTATAGTGCACCATATTATTCT-TTTGAGGCGTCTACACAAGGGCCATTTA 3845 | | || || | || |||| | |||| ||||| || |||||||| Sbjct 37479 TAATGTAGGCTTTA-TGCAGCCCTTTATGAACTTTGAATATAGTAATGGAGGGCCATACC 37421 Query 3846 AAACACCTATTGCAGCAGGACgggggggAGCGCAAACATATGAAAATCAAGCAGCAGATG 3905 ||||| | | | || || | | | | ||| || |||| | | | || | ||| Sbjct 37420 TTACACCAAGAGTACCA--ACCAGAGACA-CACAAGCAAATGA---TGACGAAGAAAATG 37367 Query 3906 GTGATCCA--AGA-TATGCATTTGGTAGACAACATGGTCAAAAAACTACCACAACAGGAG 3962 | ||| | ||| | |||| || |||||||| |||| | || ||| | || | Sbjct 37366 G--ATCTATCAGAGTGAGCATGGATTAC-CAACATGGACAAA---CCACAACAGCCGGTG 37313 Query 3963 AAACACCTGAGAGATTTACATATATAGCACA-TCAAGATACAGGAAGAT-ATCCAGAAGG 4020 | |||| | |||| ||||| | | || | || | | | |||||| | | ||| Sbjct 37312 ACACACTAGGCAGATACACATACACACCAGAATCCACAG-CTGGAAGAGCAGGAAAAAGA 37254 Query 4021 AGATTGGATTCAAAATATTAACTTTAACCTTCCTGTAACGAATGATAATGTA--TTGCTA 4078 || || | |||| | |||||| | | ||| || | | | | ||||| Sbjct 37253 AGCTTCC-TACAAACTGCTAACTTACAAATGGAG--AACACATAAGCAGGCACTTTGCTG 37197 Query 4079 CCAACAGATCCAATTGGAGGTAAAACAGGAATTAACTATACTAATATATTTAATACTTAT 4138 ||||| |||||||||| ||| ||| | | || | | | || | | | ||||| ||| Sbjct 37196 CCAACTGATCCAATTGCAGGAAAAGCTGACATACATTTTTACAACACAATGAATACCTAT 37137 Query 4139 GGTCCTTTAACTGCATTAAATAATGTACCACCAGTTTATCCAAATGGTCAAATTTGGGAT 4198 ||||| | ||||| | ||| ||||||| | || |||||||| ||||||||||| Sbjct 37136 GGTCCACTCACTGCCACTCACAATACACCACCATTGTACCCAAATGGGCAAATTTGGGAC 37077 Query 4199 AAAGAATTTGATACTGACTTAAAACCAAGACTTCATGTAAATGCACCATTTGTTTGTCAA 4258 ||| || | ||| ||| |||||||| ||||| || || ||||| ||||||||||| || Sbjct 37076 AAATAACTAGATGTTGAATTAAAACCCAGACTACACGTTAATGCTCCATTTGTTTGCAAA 37017 Query 4259 AATAATTGTCCTGGTCAATTATTTGTAAAAGTTGCGCCTAATTTAACAAATGAATATGAT 4318 || ||| |||||| ||||| || |||||| ||| ||||| | || |||| | || Sbjct 37016 AACAATCCTCCTGGCCAATTGTTGGTAAAAATTGATCCTAACCTTACTGATGACTTCAAT 36957 Query 4319 CCTGATGCATCTGCTAATATGTCAAGAATTGTAACTTACTCAGATTTTTGGTGGAAAGGT 4378 |||| ||| | | || ||||| || || ||||| | |||||||||||||| Sbjct 36956 GCTGA---CTCTCCACAACAATCTAGAATAGTGACCTACTCTAACTTTTGGTGGAAAGGA 36900 Query 4379 AAATTAGTATTTAAAGCTAAACTAAG-AGCCTCTCATACTTGGAATCCAATTCAACAAAT 4437 || | ||||| ||||||| | || ||| || || | ||||| ||| | || ||| Sbjct 36899 AAGCTCAAATTTAGAGCTAAAATGAGAAGCGTC-CACATGTGGAACCCAGTACACCAACA 36841 Query 4438 GAGTATTAATGTAGATAACCAATT--TAACTATGTACCAAGTAATATTGGAGGTATGAAA 4495 | | ||| ||| ||| |||||| |||||| || |||||||||||| | Sbjct 36840 TTCTGCCACATCAGACAAC--ATTGGTAACTACATACCAACCAACATTGGAGGTATG-AG 36784 Query 4496 ATTGTAT-ATGAAAAATCTCAACTAGCACCTAGAAAATTATATTAACATACTTACTATGG 4554 | ||||| |||| |||||||| | || ||||| | || ||| ||| || ||| Sbjct 36783 ACTGTATCCAGAAATTTCTCAACTTGTGCCAAGAAAGATGTACTAA---ACTAACCATGC 36727 Query 4555 TTTTT 4559 ||||| Sbjct 36726 TTTTT 36722 Score = 197 bits (218), Expect = 5e-47 Identities = 509/764 (67%), Gaps = 41/764 (5%) Strand=Plus/Minus Query 1892 AAACATGGTTATGAATCAACCATGGCTAACTATACACATCATTGGGGAAAAGTACCAGAA 1951 ||| || |||| || |||| ||||| | ||| | || |||||||| || ||||| || Sbjct 39470 AAAAATAATTATCAACCAACAATGGCAAGCTACATGCACCATTGGGGGAATGTACCCGAT 39411 Query 1952 TGGGATGAAAACTGGGCGGAGCCTAAAATACAAGAAGGTATAAATTCACCA---GGTTGC 2008 ||| ||||||||||||||||| || ||| || ||||||| |||| | || Sbjct 39410 TGGTCAGAAAACTGGGCGGAGCCAAAGATAGCTCCAGCTATAAATGTACCAACAGCTTCT 39351 Query 2009 AAAGACTTAGAGACACAAGCGGCAA---GCAATCCTCAGAGTCAAGACCAAGTTCTAACT 2065 | ||| | | | | || | | ||| ||||| || || || | | || ||| Sbjct 39350 CCAAACTCACTATCTCCAACGACCAAGAGCACTCCTCTCAGCCAGAACTACGCACTCACT 39291 Query 2066 CCTCTGACTCCGGACGTAGTGGACCTTGCACTGGAACCGTGGAGTACTCCAGATACGCCT 2125 || || | ||| | | ||||||||| |||||||| ||||| ||||||| || ||| Sbjct 39290 CCATTGGCCAGCGACCTTGCGGACCTTGCTCTGGAACCTTGGAGCTCTCCAGACACACCT 39231 Query 2126 ATTGCAGAAACTGCAAATCAACAAT-CAAACCAACTTGGCGTTA----CTCACAAAGACG 2180 | | | | || | |||||| ||| ||||| | ||| ||| | Sbjct 39230 TTGGTGGCCAATG----TGAACAATACAATTGTTCTTGGTGGAGAAGGCTCTCAA---CC 39178 Query 2181 TGCAAGC--GAGTCCGACGTGGTCCGAAATAGAGGCAGACCTGAGAGCCATCTTTACTTC 2238 ||||| ||| || || ||||| || ||||| |||||||||||| | ||| Sbjct 39177 TGCAATTCAGAGCCCAACTTGGTCAGAGATAGAAAAAGACCTGAGAGCT-TGTTT----- 39124 Query 2239 TGAACAATTGGAAGAAGATTTTCGAGACGACTTGGATTAAGGTACGATGGCACCTCCGGC 2298 |||| || | ||||| || | | | | | | || | |||||| ||||| Sbjct 39123 TGAAGAA--GACAGAAGCTTCAGTGGCCTGCCGGCACTTG---ACTAAGGCACCACCGGC 39069 Query 2299 AAAGAGAGCCAGGAGAGGTAAGGGTGTGTTAGTAAAGTGGGGGGAGGGGAAAGATTTAAT 2358 ||||| || | |||||||||||| | ||| || || ||| ||| | | || Sbjct 39068 CAAGAGGGCGCGAAGAGGTAAGGGT----TGGTACAG-GGAGGGTGGGTTGTTAATAAAA 39014 Query 2359 AACTTA-ACTAAG----TATGTGtttttttATAGGACTTGTGCCTCCAGGTTATAAATAT 2413 || || | ||| || | ||||||| |||| |||||||||| || || ||||| Sbjct 39013 TACATATAGTAATATTATACTTTTTTTTTTTTAGGTTTTGTGCCTCCGGGATACAAATAC 38954 Query 2414 CTTGGGCCTGGGAACAGTCTTGACCAAGGAGAACCAACTAACCCTTCTGACGCCGCTGCA 2473 ||||| || || ||| || ||||||| |||||| || || || |||||||| |||||| Sbjct 38953 CTTGGACCAGGCAACTCACTAGACCAAGAAGAACCTACAAATCCATCTGACGCAGCTGCA 38894 Query 2474 AAAGAACACGACGAAGCTTACGCTGCTTATCTTCGCTCTGGTAAAAACCCATACTTATAT 2533 ||||||||| |||| ||||| | || || ||||||||||| || || || || Sbjct 38893 AAAGAACACAACGAGGCTTATGACCAATACCTAAAATCTGGTAAAAATCCTTATTTTTAC 38834 Query 2534 TTCTCGCCAGCAGATCAACGCTTTATAGATCAAACTAAGGACGCTAAAGATTgggggggg 2593 || || || | ||||| |||||||||| |||||| | | || ||||||||||| || Sbjct 38833 TTTTCACCCTCTGATCAGTGCTTTATAGAGCAAACTGAAGGGGCAAAAGATTGGGGAGGC 38774 Query 2594 AAAATAGGACATTAtttttttAGAGCTAAAAAGGCAATTGCTCC 2637 |||||| || || || ||| |||| || ||| ||||||| Sbjct 38773 CGAATAGGCCACTACTTCTTTCGAGCAAAGCGAGCAGTTGCTCC 38730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16818023864680