Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apodemus_20sylvaticus_20[genbank_20GCA_5F001305905.1_202015-10-02] 559,629 sequences; 3,758,143,898 total letters Query= NC_016752.1 Length=4595 Score E Sequences producing significant alignments: (Bits) Value seq1723 87.8 5e-14 >seq1723 Length=1657771 Score = 87.8 bits (96), Expect = 5e-14 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 1014 AACACAATTTGGCTATATGGCCCAGCCACAACAGGGAAGACTAATCTAGCATCTGCTATA 1073 ||||| || ||||| |||||||| ||||| || || ||||| ||| | || ||||| Sbjct 975108 AACACCATCTGGCTTTATGGCCCGGCCACCACTGGCAAGACAAATATTGCTGAGGCTATT 975167 Query 1074 GCTAGAGCCAGTGGGAAT-TATGGCTGTGTGAACTGGAACAACGCAAATTTCCCATTTAA 1132 || | | | ||| | ||||| ||||||||||||| ||| | | || ||||| || Sbjct 975168 GC-ACATGCTGTGCCTTTCTATGGATGTGTGAACTGGACCAATGAGATCTTTCCATTCAA 975226 Query 1133 TGACTGTGTAGACAAAATGCTAATTTGGTGGGAGGAGGGATCGATGA 1179 |||| || ||||| ||||| || |||||||| || || ||||| Sbjct 975227 CGACTTCGTGGACAAGATGCTCATCTGGTGGGAAGAAGGCAAGATGA 975273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14502683211600