Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq9192 89.7 2e-14 >seq9192 Length=405504 Score = 89.7 bits (98), Expect = 2e-14 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 1338 AAGACCAACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGG 1397 ||| ||||||| | ||||| || ||||| |||| || || || | ||| | |||||| Sbjct 189915 AAGTCCAACATTGGTGAGGCTATTGCCCATGCTGTACCATTTTATAGCTGCATCAACTGG 189974 Query 1398 ACCAATGAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAG 1457 ||||| | |||||||||| | |||| | || | ||| | || || ||||| || Sbjct 189975 ACCAACAAAAACTTTCCCTGTATTGACTACATTGAGGAAATGCTCATTTGATGGGAAGAA 190034 Query 1458 GGGAAGATGACCGCCAAGGTCGTGGAGTC 1486 || ||||||||| |||| || |||||||| Sbjct 190035 GGCAAGATGACCCCCAAAGTAGTGGAGTC 190063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14857361141220