Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq9192 107 6e-20 >seq9192 Length=405504 Score = 107 bits (118), Expect = 6e-20 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1547 TGCCACCACCGGGAAGACCAACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGG 1606 ||| ||| | | ||| ||||||||| || |||||||||||||||||||| || ||| | Sbjct 189902 TGCGACCTTCAGAAAGTCCAACATTGGTGAGGCTATTGCCCATGCTGTACCATTTTATAG 189961 Query 1607 CTGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGAT 1666 ||| | |||||||| || | |||||||| | || ||| | |||| ||||||| || Sbjct 189962 CTGCATCAACTGGACCAACAAAAACTTTCCCTGTATTGACTACATTGAGGAAATGCTCAT 190021 Query 1667 TTGGTGGGAGGAGGGAAAAATGAC 1690 ||| ||||| || || || ||||| Sbjct 190022 TTGATGGGAAGAAGGCAAGATGAC 190045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16223444949855