Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq9192 82.4 2e-12 >seq9192 Length=405504 Score = 82.4 bits (90), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 1339 CCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCA 1398 ||||||| | || || || ||||| || || || || || ||||| | |||||||||| Sbjct 189919 CCAACATTGGTGAGGCTATTGCCCATGCTGTACCATTTTATAGCTGCATCAACTGGACCA 189978 Query 1399 ATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCA 1458 | | |||||||||| | || | | | || | ||| | || || ||||| || |||| Sbjct 189979 ACAAAAACTTTCCCTGTATTGACTACATTGAGGAAATGCTCATTTGATGGGAAGAAGGCA 190038 Query 1459 AGATGACGGCCAAGGTCGTGGAG 1481 ||||||| |||| || |||||| Sbjct 190039 AGATGACCCCCAAAGTAGTGGAG 190061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15007726337955