Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_004828.1 Length=4694 Score E Sequences producing significant alignments: (Bits) Value seq9192 131 5e-27 >seq9192 Length=405504 Score = 131 bits (144), Expect = 5e-27 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 1226 ACACGCTGTGGCTGTTCGGACATGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTG 1285 |||| ||||| ||| || ||||||| | | ||| ||||||| | |||||||||| Sbjct 189880 ACACAATGTGGTTGTATAGATTTGCGACCTTCAGAAAGTCCAACATTGGTGAGGCTATTG 189939 Query 1286 CCCATGCTGTGCCGTTCTATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACG 1345 |||||||||| || || ||| | ||| | |||||||||||| | |||||||| | | | Sbjct 189940 CCCATGCTGTACCATTTTATAGCTGCATCAACTGGACCAACAAAAACTTTCCCTGTATTG 189999 Query 1346 ACTGCGTCGAAAAAATGATTATCTGGTGGGAGGAGGGCAAAATGACCGCCAAAGTGGTGG 1405 ||| | | || ||||| | || || ||||| || ||||| |||||| ||||||| |||| Sbjct 190000 ACTACATTGAGGAAATGCTCATTTGATGGGAAGAAGGCAAGATGACCCCCAAAGTAGTGG 190059 Query 1406 AAACAGCCAAGG 1417 | ||| |||| Sbjct 190060 AGTCAGTGAAGG 190071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14905350033795