Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq9192 131 5e-27 >seq9192 Length=405504 Score = 131 bits (144), Expect = 5e-27 Identities = 126/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 1558 TGCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCCATGCTGTACCCTTCTATGG 1617 ||||||| | ||||| ||||||| | ||||||||||||||||||||||| || ||| | Sbjct 189902 TGCGACCTTCAGAAAGTCCAACATTGGTGAGGCTATTGCCCATGCTGTACCATTTTATAG 189961 Query 1618 CTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACTGCGTTGATAAAATGCTTAT 1677 ||| | |||||||| || | ||||| || | || ||||| | |||| ||||||| || Sbjct 189962 CTGCATCAACTGGACCAACAAAAACTTTCCCTGTATTGACTACATTGAGGAAATGCTCAT 190021 Query 1678 ATGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTGGAATC 1719 || ||||| || || || |||||| ||||||||||| || Sbjct 190022 TTGATGGGAAGAAGGCAAGATGACCCCCAAAGTAGTGGAGTC 190063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16306625696985