Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq9192 100 9e-18 >seq9192 Length=405504 Score = 100 bits (110), Expect = 9e-18 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 1307 GGAAGCGCA-ACACCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACATTGCG 1365 ||||| || |||| || ||| ||| | | || ||| | | ||| ||||||||| Sbjct 189870 GGAAGGACAGACACAATGTGGTTGTATAGATTTGCGACCTTCAGAAAGTCCAACATTGGT 189929 Query 1366 GAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTT 1425 || || || ||||| || || || || || ||||| ||||||||||||| | |||||| Sbjct 189930 GAGGCTATTGCCCATGCTGTACCATTTTATAGCTGCATCAACTGGACCAACAAAAACTTT 189989 Query 1426 CCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCC 1485 |||| | || | | | || | ||| | || || ||||| || ||||||||||| || Sbjct 189990 CCCTGTATTGACTACATTGAGGAAATGCTCATTTGATGGGAAGAAGGCAAGATGACCCCC 190049 Query 1486 AAGGTCGTGGAGTCCGCCAAGGCCATTCTC 1515 || || |||||||| | |||| || ||| Sbjct 190050 AAAGTAGTGGAGTCAGTGAAGGTTATCCTC 190079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14991730040430