Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_006261.1 Length=4393 Score E Sequences producing significant alignments: (Bits) Value seq9192 109 2e-20 >seq9192 Length=405504 Score = 109 bits (120), Expect = 2e-20 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 1215 ACACCATCTGGCTGTTTGGACCCGCCACCACCGGCAAGACCAACATTGCGGAAGCCATCG 1274 |||| || ||| ||| | || || ||| | | ||| ||||||||| || || || | Sbjct 189880 ACACAATGTGGTTGTATAGATTTGCGACCTTCAGAAAGTCCAACATTGGTGAGGCTATTG 189939 Query 1275 CCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAATG 1334 |||| || || || || || ||||| ||||||||||||| | |||||||||| | || Sbjct 189940 CCCATGCTGTACCATTTTATAGCTGCATCAACTGGACCAACAAAAACTTTCCCTGTATTG 189999 Query 1335 ATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGG 1394 | | | | || | ||| | || || ||||| || ||||||||||| |||| || |||| Sbjct 190000 ACTACATTGAGGAAATGCTCATTTGATGGGAAGAAGGCAAGATGACCCCCAAAGTAGTGG 190059 Query 1395 AGTCCGCCAAGGCCATTCTC 1414 |||| | |||| || ||| Sbjct 190060 AGTCAGTGAAGGTTATCCTC 190079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13942372922790