Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq9192 123 7e-25 >seq9192 Length=405504 Score = 123 bits (136), Expect = 7e-25 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 1226 ACACGCTGTGGCTGTTCGGACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTG 1285 |||| ||||| ||| || ||||||| | | ||| ||||||| | |||||||||| Sbjct 189880 ACACAATGTGGTTGTATAGATTTGCGACCTTCAGAAAGTCCAACATTGGTGAGGCTATTG 189939 Query 1286 CCCATGCTGTGCCGTTCTATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACG 1345 |||||||||| || || ||| | ||| | |||||||||||| | |||||||| | | | Sbjct 189940 CCCATGCTGTACCATTTTATAGCTGCATCAACTGGACCAACAAAAACTTTCCCTGTATTG 189999 Query 1346 ACTGCGTCGAAAAGATGATTATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGG 1405 ||| | | || | ||| | || || |||||||| ||||| |||||| |||| || |||| Sbjct 190000 ACTACATTGAGGAAATGCTCATTTGATGGGAAGAAGGCAAGATGACCCCCAAAGTAGTGG 190059 Query 1406 A 1406 | Sbjct 190060 A 190060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14866958919735