Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castor_20canadensis_20[refseq_20GCF_5F001984765.1_202017-02-04] 21,157 sequences; 2,518,306,565 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq9192 77.0 9e-11 >seq9192 Length=405504 Score = 77.0 bits (84), Expect = 9e-11 Identities = 107/150 (71%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 1211 GAGGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAACGAGAACTTC 1270 ||||| || ||| | || || || || ||||| |||||||||||||| | ||||| Sbjct 189930 GAGGCTATTGCCCATGCTGTACCATTTTATAGCTGCATCAACTGGACCAACAAAAACTTT 189989 Query 1271 CCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAGATGACGTCC 1330 |||| | |||| | | || | ||| |||| || ||||| || ||||||||||| || Sbjct 189990 CCCTGTATTGACTACATTGAGGAAATGCTCATTTGATGGGAAGAAGGCAAGATGACCCCC 190049 Query 1331 AAGGTCGTCGAGAGCGCCAAGGCCATCCTC 1360 || || || ||| | |||| |||||| Sbjct 190050 AAAGTAGTGGAGTCAGTGAAGGTTATCCTC 190079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13600052155755