Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq50 100 9e-18 >seq50 Length=18100965 Score = 100 bits (110), Expect = 9e-18 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 1506 AGAGAGTTCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACC 1565 || |||||| || ||||| || ||||||||| |||||| || | ||||| |||||| Sbjct 18095013 AGGGAGTTCGGGAAGCGAAACACCGTATGGCTCTTCGGACCGCCCTCGACCGGCAAGACC 18094954 Query 1566 AACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAAT 1625 ||| | || || || || || || | || ||| | | | || || | |||||| ||| Sbjct 18094953 AACCTGGCGGAGGCCATCGCTCACACCGTGCCCATGTTCGAATGCGTCAGCTGGACGAAT 18094894 Query 1626 GAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAA 1685 ||||| ||||| | || || || | |||||||| || ||||||||||| || || Sbjct 18094893 AGCAACTTCCCTTTCAGAGACTGCGTCGGAAAAATGCTCATCTGGTGGGAGGAAGGGAAG 18094834 Query 1686 ATGAC 1690 ||||| Sbjct 18094833 ATGAC 18094829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16226696120085