Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_001510.1 Length=5149 Score E Sequences producing significant alignments: (Bits) Value seq6026 78.8 3e-11 >seq6026 Length=248855 Score = 78.8 bits (86), Expect = 3e-11 Identities = 104/142 (73%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 3294 ATACAACAATGACCTTACAGCTTGCATGATGGTTGCAGTAGACTCAAACAACATTTTGCC 3353 ||| |||||||||||||| || | |||| |||||| |||||| | |||||||| |||| Sbjct 4842 ATATAACAATGACCTTACTGCATCCATGCAGGTTGCTGTAGACACCAACAACATACTGCC 4901 Query 3354 ATACACACCTGCAGC-AAACTCAATGGAAACACTTGGTTTCTACCCCTGGAAACCAACCA 3412 |||||| || ||||| ||| ||| || || || || || |||| | |||||| Sbjct 4902 ATACACTCCAGCAGCTCCACT-GGGGGAGACTCTGGGCTTTGTGCCTTGGAGAGCAACCA 4960 Query 3413 TAGCATCACCATACAGGTACTA 3434 | || | | ||||| ||||| Sbjct 4961 AACCAACCCAGTACAGATACTA 4982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16354342867230