Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20lutescens_20[genbank_20GCA_5F001685075.1_202016-07-14] 58,423 sequences; 2,353,188,398 total letters Query= NC_025825.1 Length=4928 Score E Sequences producing significant alignments: (Bits) Value seq6026 861 0.0 seq1077 830 0.0 >seq6026 Length=248855 Score = 861 bits (954), Expect = 0.0 Identities = 1108/1511 (73%), Gaps = 37/1511 (2%) Strand=Plus/Plus Query 2532 AACAGCACCGGCGGCTTTAATAATACAACAGAATTTAAAGTAATAAACAATGAAGTATAT 2591 || ||||| || ||||| ||||| || ||||| ||||| || | |||||||| || | Sbjct 4447 AAGAGCACAGGGGGCTTCAATAACACCACAGAGTTTAAGGTTACTAACAATGAGGTTACT 4506 Query 2592 ATTACTTGTCATGCTACTAGAATGGTACACATCAACCAAGCTGACACAGATGAATATGTA 2651 |||||||| |||||||| || | || ||||||||||| |||||||||||||| || | Sbjct 4507 ATTACTTGCCATGCTACAAGGGTAGTGCACATCAACCAGGCTGACACAGATGAGTACTTG 4566 Query 2652 ATATTTAATGCTGGTAGAACTACTGATACTAAAACACATCTaaaaaaaCTAA----ACTT 2707 ||||| ||||| || || || | || || | |||| | ||| |||| Sbjct 4567 ATATTCAATGCAGGCAGGAC-AGTGGAGGACAAGCCTGTCTACAGGGACTCTCTGGACTT 4625 Query 2708 AGAATTTTTTGTATATGACGACTTTCACCAACAAGTAATGACACCTTGGTTTCTAGTGGA 2767 || || ||| | | ||| ||||| ||||||||||| |||||||||||||| || ||||| Sbjct 4626 GGAGTTCTTTATCTTTGATGACTTCCACCAACAAGTCATGACACCTTGGTTCCTGGTGGA 4685 Query 2768 TAGTAACGCTTGGGGCGTATGGATGAGTCCTAAAGACTTTCAACAGATGAAAACACTATG 2827 || || || ||||| || |||||||||||||| |||||||| |||||||| | || || Sbjct 4686 CAGCAATGCCTGGGGTGTGTGGATGAGTCCTAAGGACTTTCAGCAGATGAAGATCCTGTG 4745 Query 2828 TAGTGAAATTGAGTTGGTTACTTTGGAACAAGAAATAGACAATGTAACTATAAAAACTGT 2887 ||||| |||||||||||||||||||| || || ||||||||||| ||||| || || || Sbjct 4746 CAGTGAGATTGAGTTGGTTACTTTGGAGCAGGAGATAGACAATGTGACTATCAAGACAGT 4805 Query 2888 AACAGAA-ACCAACCAAGGTAATGCATCTACAAAGCAATTTAACAATGATTTAACTGCAT 2946 ||||| | |||| | || ||||| | |||||||| ||||||||| | ||||||| Sbjct 4806 GACAGAGCAGCAAC-AGGGCAATGCCACAGTAAAGCAATATAACAATGACCTTACTGCAT 4864 Query 2947 CTTTACAGGTTGCTTTGGATACTAACAACATATTGCCATATACTCCAGCTGCGCCATTAG 3006 | | ||||||||| | || || ||||||||| ||||||| |||||||| || ||| | | Sbjct 4865 CCATGCAGGTTGCTGTAGACACCAACAACATACTGCCATACACTCCAGCAGCTCCACTGG 4924 Query 3007 GGGAAACACTAGGCTTTGTTCCTTGGAGAGCAACCAAACCAACCCAATATAGATACTATC 3066 |||| || || |||||||| |||||||||||||||||||||||||| || |||||||| | Sbjct 4925 GGGAGACTCTGGGCTTTGTGCCTTGGAGAGCAACCAAACCAACCCAGTACAGATACTACC 4984 Query 3067 ATCCATGTTACATTTACAACAGATACCCTAACATTCAAAA--AGTAG--GACAGCAACTA 3122 ||||||||||| | |||||||| |||||| |||||||||| ||| ||||| | ||| Sbjct 4985 ATCCATGTTACTTGTACAACAGGTACCCTGACATTCAAAAGAAGTCACAGACAG-AGCTA 5043 Query 3123 GATTATGATGCAGTTCAAGATGATTACCTTGCTG-TGGATGAACAATACTTTAACTTTAT 3181 | || | | | || | |||||| |||| | || | | |||||||||||||| Sbjct 5044 GCCTACCAAGGGGCCCAGAAGGATTAC-TTGCACATAGAGCAGGACTACTTTAACTTTAT 5102 Query 3182 TACTATAGAAAATAACATACCTATTAATATTCTTAGAACAGGAGATAACTTTCATACGGG 3241 || | || || |||||||| || | || || || ||||| || ||||| || || || Sbjct 5103 CACAGTGGAGAACAACATACCAATCCAGATACTGAGGACAGGGGACAACTTCCACACAGG 5162 Query 3242 CTTGTATGAATTTAAGAGTAAACCATGTAAACTAACCTTAAGCTACCAAAGTACACGTTG 3301 ||||| || ||||| |||||||| ||||||||| | ||| | || || |||||||| Sbjct 5163 AACCTATGAGTTCAAGAGCAAACCATGCAAACTAACCATGAGCCATCAGAGCACACGTTG 5222 Query 3302 CCTGGGTTTACCTCCTCTATGCAAGCCAAAAACAGATAAAACACACAAAGTAACATCATT 3361 ||| ||| | |||||||| |||||| | || | ||| | || | |||||| || | Sbjct 5223 CCTTGGTCTGCCTCCTCTGTGCAAGGCCAAGAGAGACAGCACCATCCTAGTAACCTC-TA 5281 Query 3362 AGAA-AACGGAGGTGACGTG--CAA-TACTTACAGGAAGCAAACAATATCAGACTAGGTC 3417 || | || ||||||||| || ||| ||| | ||| || || || || | |||| Sbjct 5282 AGCAGAATGGAGGTGACATGGACAACTACATTGAGGGTACAGACCATGGTAGGATGGGTC 5341 Query 3418 ACTTTTGGGGTGAAGA-AAGAGGTCATAAAAACGCAGAAATAAACAGAGTAAGACCTTAC 3476 ||||||||||||| || |||| | | || ||| |||| || |||||||| || || ||| Sbjct 5342 ACTTTTGGGGTGAGGAGAAGA-GCAAGAAGAACACAGAGATCAACAGAGTGAGGCCATAC 5400 Query 3477 AACATAGGTTACCAATTTCCTGAATGGGTAATACCAGCAGGATTACAGGGTAGTTACTTT 3536 |||||||| ||||| |||||||| ||| || | |||||||| | ||||||||||||||| Sbjct 5401 AACATAGGGTACCAGTTTCCTGAGTGGATAGTGCCAGCAGGGCTGCAGGGTAGTTACTTT 5460 Query 3537 GCTGGAGGGCCAAGACAGTGGAGTGACACAACCAAAGGTGCAGGTACGCACTCTCAGCAA 3596 |||| || || || |||||||||||||| | ||| |||||||| || ||| | | Sbjct 5461 ACTGGGGGACCTAGGCAGTGGAGTGACACCATCAAGGGTGCAGGCACTCACAGTAGTGAG 5520 Query 3597 CTCCAACAAAACTTTAGTACAAGATACATCTTTGATAGAAATCACGGTGGAGATAATGAA 3656 || ||||| |||||||| || || ||||||||||| || || || || || || || || Sbjct 5521 CTGCAACAGAACTTTAGCACCAGGTACATCTTTGACAGGAACCATGGGGGGGACAACCAA 5580 Query 3657 GTAGACACACTTAGTGCAATACCTATTCATGAAAGAAATAAGTACTACACAGAGAGTGAA 3716 || ||||| | | | |||||||| ||||| | || |||| | ||||| || Sbjct 5581 GTGGACACTGTGGACTCGGTGCCTATTCAGGAAAGGAGGAACTACTTCTCAGAGTCAGAG 5640 Query 3717 ATAGAACATCATACAGCAAAGCAAC--CAAAGTTAAGTACA------------CCACCCA 3762 |||| || | || ||||| ||| ||| | | | ||| ||| || Sbjct 5641 CTAGATCA--AAGCAACAAAGTAACAGCAACCTCAGGGACAGGGGCCAGAGGGCCAGGCA 5698 Query 3763 TACATCACTCAAAGATAGATTCATGGGAAGAGGAAGGTTGGCCTGCTGCTTCAGGAACAC 3822 |||| ||| | || |||| | ||||| || || || ||||||||||| ||| | |||| Sbjct 5699 TACACCACACCAAAGTAGACTACTGGGAGGATGAGGGGTGGCCTGCTGCCTCATGCACAC 5758 Query 3823 ACTTTGAAGATGAGGTCATATACTTAGATTACTTTAACTTTTCTGGTGAACAAACTCTAG 3882 ||||||| |||||||| | ||||| || | |||||||| | ||| | || |||| Sbjct 5759 ACTTTGAGGATGAGGTACTTTACTTTGACTCCTTTAACTATGGCACTGAGAAGACCCTAG 5818 Query 3883 ACTTTCCACAAGAACTATTAGCTGATGGTGCTCAAATGAAAAAACTACTTAACTCATATC 3942 ||||||| || || | ||| || | |||| || ||| || |||| | Sbjct 5819 ACTTTCCTCAGGAGATTATAGACACAGGCAAGCTGCTGAAGAAGACACTCAATGCATACC 5878 Query 3943 AACCAACCGTTGGTCAAGACAATGTTGGTCCTGTATACCCATGGGGACAAGTATGGGACA 4002 ||||||| || | ||| || |||| || || || || || ||||| || ||||||||| Sbjct 5879 AACCAACGGTAGCTCAGGATGATGTGGGGCCAGTGTATCCCTGGGGCCAGATATGGGACA 5938 Query 4003 AGAAACCTGAC 4013 ||||||||||| Sbjct 5939 AGAAACCTGAC 5949 Score = 839 bits (930), Expect = 0.0 Identities = 997/1345 (74%), Gaps = 37/1345 (3%) Strand=Plus/Plus Query 1172 ACCAACTAAGCAACCATCTaaaaaaaTGTGCTCAGCTCAAAGTACTTTAGAAGAACTATA 1231 |||| | |||||||| |||||||| ||| || |||| | || | ||||| | || | Sbjct 7111 ACCAGCAAAGCAACCTTCTAAAAAGATGAGCACAGCCAAGAGCAACCTAGAAAAGCTGTT 7170 Query 1232 TAACTTTGGTTGCTTTACTCAAGAAGACATGATTTTAAAGATGAGTGATAGGTACCTTGA 1291 || ||| ||||||||||||| ||| |||||||| ||||||||| |||| || ||||| Sbjct 7171 TAGCTTAGGTTGCTTTACTCCAGAGGACATGATCTTAAAGATGGGTGAGGACTATCTTGA 7230 Query 1292 AATATCTTTAGAATCAAACGGGCCTCAAAAAATTAGCACTTTGCTTCACATGAACCAAGT 1351 | || |||||| |||| |||| || || || | || |||||||||||||||||||| Sbjct 7231 GCTGTCCTTAGAAACAAATGGGCTGCAGAAGATAGGTACCTTGCTTCACATGAACCAAGT 7290 Query 1352 AAGGACATCAAGCATACTTACTGCCTTTGATTGTATTAAAAAATTTAATGAAGATGAAAA 1411 || |||| || || ||| ||||||||||| || || | || || ||||||| || Sbjct 7291 AAAGACAGCATCCACACTGACTGCCTTTGAATGCATACTGCAGTTCAACCAAGATGAGAA 7350 Query 1412 TGACCAACCT---TTACTAGCAACCTTAAAAGAGATGGGACTTAATGAAAAAGTACTTAA 1468 ||| ||| |||| || | | ||||| ||||| ||| | || | ||| || Sbjct 7351 TGAGGGACCACTGTTACAAGTGA---TTAAAGACATGGGCCTTGAAGAGCAGACACTGAA 7407 Query 1469 ACAAGTATTAGGTACCGTTTTATCTAAGCAAAGTGGCAAAAGAGGTTGCATTTGGTTTTA 1528 | || ||||| ||| | || | |||||| |||| || ||||||||||| ||||| || Sbjct 7408 GAAGGTTTTAGGAACCATACTAACCAAGCAAGGTGGAAAGAGAGGTTGCATCTGGTTCTA 7467 Query 1529 TGGACCAGGAGGTACTGGAAAGACCTTGCTAGCAGCACTACTATGCAAAGCAACATTAAA 1588 |||||||||||| ||||||||||| |||| || || ||||| ||||| | | || Sbjct 7468 TGGACCAGGAGGCACTGGAAAGACACTGCTGGCCAGTCTGATATGCCAAGCAGTAGTTAA 7527 Query 1589 CTATGGTATGGTTACTACAAGCAATCCGAACTTCCCATGGACTGACTGTGGTAATAGAAA 1648 || ||||||||||||||| |||||||| ||||| ||||||||||||||||| || || || Sbjct 7528 CTTTGGTATGGTTACTACCAGCAATCCAAACTTTCCATGGACTGACTGTGGGAACAGGAA 7587 Query 1649 CCTTATTTGGCTTGAAGAATGTGGTAACTTAGGTAACTGGGTTGAAGACTTTAAAGCCAT 1708 | || ||| |||||| ||||||||||| ||||||| || ||||||||||| ||||| Sbjct 7588 CATTTGCTGGGCTGAAGAGTGTGGTAACTTGGGTAACTTTGTGGAAGACTTTAAGGCCAT 7647 Query 1709 TACTGGAGGTGGTGATGTAAAAGTGGATACCAAAAACAAGCAACCTCAATGTATTAGAGG 1768 |||||||| || |||| || || || ||||| |||||||||||||| | || | || Sbjct 7648 CACTGGAGGAGGCAATGTGAAGGTAGACACCAAGAACAAGCAACCTCAGTCCATAAAGGG 7707 Query 1769 AAATGTAATTGTGACAAGTAACACCAACATTACAAAAGTAACTATTGGATGTGTAGAATC 1828 | | || |||||||| ||||||||||| || ||||||||| | ||||||||||| | Sbjct 7708 CACCATGATAGTGACAAGCAACACCAACATCACCAAAGTAACTGTGGGATGTGTAGAGAC 7767 Query 1829 CAGCGCTCATGTTGAACCACTTAAGCAAAGAATGGTAAAGGTACGTTGCATGAATCAAAT 1888 ||| |||||||| || ||||| ||||| || ||||| || || | |||||| | | || Sbjct 7768 CAGTGCTCATGTAGAGCCACTGAAGCAGAGGATGGTTAAAGTGAGATGCATGCACCGCAT 7827 Query 1889 CAACCCTAAAAGCAAAATAACACCAGGAATGTTAAGAAAATGGCT-AGCTTCCTGGGATG 1947 |||||||| ||||||| |||||||||| ||| | ||||||||||| ||| | ||||| Sbjct 7828 CAACCCTAGAAGCAAACTAACACCAGGGATGCTTAGAAAATGGCTGAGC-ACATGGGACA 7886 Query 1948 GAATACCAATCAAACTAAACCATGAAATGCCTGACCTTTACTTAGGTAAGTACATCATGG 2007 | |||||| | ||| ||||||| |||||||| || || | ||| |||||| || | Sbjct 7887 TGAAACCAATGATCCTAGACCATGAGATGCCTGAGCTCTATGTTGGTGAGTACAGCAAAG 7946 Query 2008 TAAGTAACA-CATTTTTAAATACCAACTTTAAAACTAACATATACT---TATAAGATTAC 2063 ||||||||| || || || || |||||| | |||| ||| | | |||| Sbjct 7947 TAAGTAACATCAAATT--AACACTCACTTTACTGGAAGCATAGACTGACTGGTTGGTTAC 8004 Query 2064 TTTACTTTACAGACCACGAGACTACTGGACAAAACTCGAGTGCCACAACTGCCAGGAACA 2123 |||||||| ||| || |||||||||||||| ||| ||||||| ||| |||||| ||| Sbjct 8005 TTTACTTTGCAGGAGACAAGACTACTGGACAAGACTTGAGTGCCTCAAGTGCCAGCAACC 8064 Query 2124 TTACTGGCAACTTACAACCTACTACTGCAGAGANNNNNNNNNNNNNNGGCACAACAAACT 2183 ||||||||| || || ||||||||||||||||| |||||| ||||| Sbjct 8065 TTACTGGCAGCTCACTACCTACTACTGCAGAGACTGTAGACAGTGCCAGCACAAGAAACT 8124 Query 2184 CCGATACACAAAAAAGGAATGTGAGCAGTGTGCCTCAGAAGCAGCACAAGAGACCTCGGC 2243 | ||||| ||||||| || |||||||| || | |||||||| ||||| |||||| Sbjct 8125 TCAGTACACCAAAAAGGGCTGCGAGCAGTGCTCCACTGAAGCAGCCCAAGAAGGCTCGGC 8184 Query 2244 ATGAGTAAAAGTAAGTAACAT-TCTTAAAGTA---ATCTAACA-TTATAATACTTTACTN 2298 ||||||| ||||||||||| | | | ||| | |||||| || ||| | | | Sbjct 8185 ATGAGTAGAAGTAAGTAACCTAACATGGGGTAGCTACCTAACACTTGTAAGA--TGGATG 8242 Query 2299 NNNNTATACTTA-TAAACTTTACTTT------AGTTCCTCAGCACTTTCCTGGAAAAAAG 2351 | ||| | |||||||||| |||||||||||||| |||||| |||||| Sbjct 8243 CCAAGACACTGACCTTACTTTACTTTGCTTTCAGTTCCTCAGCACTATCCTGGGAAAAAG 8302 Query 2352 AGAAGTGCTCCAAGACACGTGTTTATTCAACAAGCaaaaaaaaGGAAGCAAACTAACCCT 2411 ||||||||||| || |||||| |||| ||||||||||| | |||||||| ||||||| Sbjct 8303 AGAAGTGCTCCGAGGTTTGTGTTTGTTCAGCAAGCAAAAAAGAAGAAGCAAAGTAACCCT 8362 Query 2412 GCAGTTTTTCACGGAGAAGACACAATAGAGGAAATGGATTCTACTGAACCTGAGCAAATG 2471 || || | |||| ||| || ||||||| ||||| |||||||| || ||| Sbjct 8363 GCGGTCTCGCACGAGGAACTTACTGTAGAGGAGATGGA------GGAACCTGAACAGATG 8416 Query 2472 GACACT---GAGCAAGCAACTAACC 2493 |||||| || |||||||| |||| Sbjct 8417 GACACTGGGGAACAAGCAACCAACC 8441 Score = 412 bits (456), Expect = 1e-111 Identities = 554/765 (72%), Gaps = 25/765 (3%) Strand=Plus/Plus Query 3833 TGAGGTCATATACTTAGATTACTTTAACTTTTCTGGTGAACAAACTCTAGACTTTCCACA 3892 |||||| | ||||| || | |||||||| | ||| | || ||||||||||| || Sbjct 9519 TGAGGTACTTTACTTTGACTCCTTTAACTATGGCACTGAGAAGACCCTAGACTTTCCTCA 9578 Query 3893 AGAACTATTAGCTGATGGTGCTCAAATGAAAAAACTACTTAACTCATATCAACCAACCGT 3952 || | ||| || | |||| || ||| || |||| |||||||| || Sbjct 9579 GGAGATTATAGACACAGGCAAGCTGCTGAAGAAGACACTCAATGCATACCAACCAACGGT 9638 Query 3953 TGGTCAAGACAATGTTGGTCCTGTATACCCATGGGGACAAGTATGGGACAAGAAACCTGA 4012 | ||| || |||| || || || || || ||||| || ||||||||||||||||||| Sbjct 9639 AGCTCAGGATGATGTGGGGCCAGTGTATCCCTGGGGCCAGATATGGGACAAGAAACCTGA 9698 Query 4013 CATGGATCACAAACCTAGTATGAACAACAACGCTCCCTTTGTATGTAAAAACAACCCTCC 4072 |||||| ||||||||||| |||||| |||| ||||||||||| || || ||||| ||||| Sbjct 9699 CATGGACCACAAACCTAGCATGAACTACAATGCTCCCTTTGTGTGCAAGAACAATCCTCC 9758 Query 4073 GGGTCAACTCTTTGTTAAACTAACAGAAAACCTCACTGATGTATTCAACTATGATGAAAA 4132 ||| || || | | ||||||||||| |||||||| || |||||||| ||||||| | Sbjct 9759 GGGGCAGCTGCTCATCAAACTAACAGAGAACCTCACAGACATATTCAACCATGATGAGGA 9818 Query 4133 TCCAGACAGAATAAAGACCTATGGTTACTTTACTTGGAGAGGCAGGCTTACACTAAAAGG 4192 ||||||||| || ||||| |||||||||||||||||||| || | ||| || |||| || Sbjct 9819 TCCAGACAGGATCAAGACATATGGTTACTTTACTTGGAGGGGAAAGCTGACTCTAAGGGG 9878 Query 4193 TAAACTAAGCCAAGTAACGTGCTGGAACCCTGTTAAAAGAGAACTAATAGGAGAACCTGG 4252 || || || || | ||||||||||| || || || || ||||| ||||| || Sbjct 9879 CAAGCTCAGTCAGACCTCATGCTGGAACCCAGTCAAGAGGGAGAGGATAGGGGAACCAGG 9938 Query 4253 TGTATTCACTAAAGATAACTATCACAAACAAATACCAAACAACAAAGGTAACTTTGAAAT 4312 | || ||| | ||||| |||| || ||||| ||||||| || |||||||| || Sbjct 9939 GATCTTTGACAAAAACAACTACCACAGGCAGATACCTAACAACAGGGGCAACTTTGAGAT 9998 Query 4313 AGGATTACAATATGGAAGAAGCACTATAAAGTATATATACTAAAATAACATAATGTTAC- 4371 |||| | || ||||| ||||||||| ||||||| ||||||||| | | ||||||| Sbjct 9999 AGGACTCCAGTATGGCAGAAGCACTGTAAAGTACATATACTAATAGGCTACTATGTTACT 10058 Query 4372 ATGTTACTANNNNNNNNNNNNNNNNNAATAACTT-ATA---AATAAAAGTTACATAAAAA 4427 ||||||||| | | |||| ||| |||||| ||||||| || | Sbjct 10059 ATGTTACTA------TGTTACTTGTTACTTACTTGATATTCAATAAATGTTACATGAAGA 10112 Query 4428 GTGATCAACCTAAATACTGTG-----TACTTCCTTATTTAACCAGAAATGACGGATTAAA 4482 ||||| |||| ||| | | || || ||||| || || ||||||||||||| | Sbjct 10113 GTGATAAACCAAAACAATATGTGTGATAGTTCCTCTTTCTACAAGAAATGACGGATAAGT 10172 Query 4483 ATAAACCTACATTCTATACTATATA-ACTAACATCTAATATACTAATACTATAGGTTACT 4541 ||| |||||||||| ||||| || |||| | ||| || || ||||||| ||||| Sbjct 10173 ATACACCTACATTCCTTACTAACTATACTA--AAGTAACTTA-TATTACTATA--TTACT 10227 Query 4542 T-TGCTTTGAAAT--ACTGATGTAGGAATACAAAATACTAACATT 4583 | |||||||| || |||||||| ||||| || |||||||| || Sbjct 10228 TATGCTTTGATATACACTGATGTGAGAATATAAGATACTAACCTT 10272 Score = 214 bits (236), Expect = 6e-52 Identities = 239/317 (75%), Gaps = 2/317 (1%) Strand=Plus/Plus Query 366 AAACCAACCAAAGCAACACCACCACTGAGAACAACATCGTCTGAACTAAGGTCAGCTTAT 425 |||||||||| |||||||||||| |||| || |||||| | |||||| ||| | | Sbjct 6555 AAACCAACCACAGCAACACCACCGTTGAGGACCACATCGGACAACATAAGGTTAGCCTTT 6614 Query 426 GATTCTATTGATGAAACTTTAACA-GCATCTACTGACTGTTTAACTAATGATGAAAAACA 484 ||||||||||| || || || | | ||| |||||||||||| |||| ||||| | | Sbjct 6615 GATTCTATTGAGGAGACCTTGAGATGCA-ATACTGACTGTTTGTCTAAGGATGAGATTAA 6673 Query 485 ATTTTGTAAGCTAGTTCTAGGAAAGACGTTGCTATTGCTTGATAACCATGTAAGAAGTCA 544 ||||| || ||| |||| ||| ||| | ||||| ||||| ||||| ||| ||| Sbjct 6674 CTTTTGCAAACTAACCTTAGGTTGGACTTTGGTGTTGCTGGATAAGCATGTGAGATCTCA 6733 Query 545 TAGATGGGATGCTAACAAAGTAAACTTTATTTGGCAGATAGAAAAAGGAAATACTAATAA 604 |||||| || || ||| || | ||| | ||||||||||| ||||| | || | | Sbjct 6734 CAGATGGAATAGTAGCAAGGTGCAGTTTGTGTGGCAGATAGAGAAAGGCACCACACAGCA 6793 Query 605 ACTTCATATTCACTGTTGCTTAGGTTACTTTGATAAGGATGAAGATAGTAAAGACACTCA 664 ||| |||||||||||||||||||||||||||||| || |||| || | |||||| || Sbjct 6794 ACTGCATATTCACTGTTGCTTAGGTTACTTTGATGAGCATGAGGACCCGAGAGACACACA 6853 Query 665 AAAATCATTAGGTTGGT 681 |||||| ||||||||| Sbjct 6854 GAAATCACTAGGTTGGT 6870 Score = 95.1 bits (104), Expect = 4e-16 Identities = 144/199 (72%), Gaps = 17/199 (9%) Strand=Plus/Minus Query 4711 AATGTTAGTATTTTGTATTCCTACATCAGT--ATTTCAAAGCA-AAGTAACCTAT--ATA 4765 || |||||||| || ||||| |||||||| || |||||||| |||||| || ||| Sbjct 10272 AAGGTTAGTATCTTATATTCTCACATCAGTGTATATCAAAGCATAAGTAATATAGTAATA 10213 Query 4766 GATGTTAGTT----ATA--TAGTATAGAATGTAGGTTTATTTTAATCCGTCATTTCTGGT 4819 | |||| || ||| ||||| |||||||||| ||| | ||||||||||||| || Sbjct 10212 TAAGTTACTTTAGTATAGTTAGTAAGGAATGTAGGTGTATACTTATCCGTCATTTCTTGT 10153 Query 4820 TAAATAAGGAAGT-----ACACAGTATTTAGGTTGATCACTTTTTATGTAACTTTTATTT 4874 || ||||| | ||| | | ||| |||| |||||| || ||||||| |||||| Sbjct 10152 AGAAAGAGGAACTATCACACATATTGTTTTGGTTTATCACTCTTCATGTAACATTTATTG 10093 Query 4875 AGAATTTATTACAGTAACA 4893 | || | || ||||||| Sbjct 10092 AATATCAAGTA-AGTAACA 10075 Score = 91.5 bits (100), Expect = 5e-15 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 6 ACTTCCTCATTCCACCAGAAATGACGGATTAATTCTCAACCAATATGAAATTAGCAAGCG 65 |||||||| ||||||||||||||||||| |||||||||||||| | | || | ||||| Sbjct 6495 ACTTCCTCTTTCCACCAGAAATGACGGA-TAATTCTCAACCAACGAG-AGTTCGGAAGCG 6438 Query 66 CGTAGCGCCCAACACCAGCGCC 87 || |||||||||||||||| || Sbjct 6437 CGAAGCGCCCAACACCAGCTCC 6416 >seq1077 Length=389203 Score = 830 bits (920), Expect = 0.0 Identities = 1223/1717 (71%), Gaps = 51/1717 (3%) Strand=Plus/Plus Query 312 GGTGAAGGACTTGCCTGGCTATTTCAACAAAAGACTTACACCGACAAGGACGGAAAACCA 371 || || || ||||| ||||| ||| | || ||| | ||||| |||| || || || || Sbjct 110942 GGCGAGGGGCTTGCTTGGCTGTTTAAGCAGAAGGCCTACACAGACAGCGAAGGCAAGCCT 111001 Query 372 ACCAAAGCAACACCACCACTGAGAACAACATCGTCTGAACTAAGGTCAGCTTATGATTCT 431 ||||||||||||||||| |||| | |||||| || ||||||| ||| | ||||||| Sbjct 111002 ACCAAAGCAACACCACCGTTGAGGAGCACATCGGAGGAGCTAAGGTTAGCCTTTGATTCT 111061 Query 432 ATTGATGA-AACTTTAACAGCATCTACTGACTGTTTAACTAATGATGAAAAACAATTTTG 490 ||||| || ||||| | ||| |||||||||| | ||| ||||| | | ||||| Sbjct 111062 ATTGAAGAGAACTTGAGATGCAA-TACTGACTGTCTGTCTAGAGATGAGATTAACTTTTG 111120 Query 491 TAAGCTAGTTCTAGGAAAGACGTTGCTATTGCTTGATAACCATGTAAGAAGTCATAGATG 550 || ||| |||| ||| ||| | ||||||||||| ||||| ||| ||| ||||| Sbjct 111121 CAAACTAACCTTAGGTTGGACTTTGGTGTTGCTTGATAAGCATGTGAGATCTCACAGATG 111180 Query 551 GGATGCTAACAAAGTAAACTTTATTTGGCAGATAGAAAAAGGAAATACTAATAAACTTCA 610 | | |||| | || | ||| | ||||||||||| ||||| | || | |||| || Sbjct 111181 GAACAGTAACCATGTGCAGTTTGTGTGGCAGATAGAGAAAGGCACCACACAGCAACTGCA 111240 Query 611 TATTCACTGTTGCTTAGGTTACTTTGATAAGGATGAAGATAGTAAAGACACTCAAAAATC 670 ||||||||||||||| ||||||| ||||||| || |||| ||||| || | ||||| Sbjct 111241 TATTCACTGTTGCTTGGGTTACTATGATAAGAATAAAGACCCAAAAGATACACTCAAATC 111300 Query 671 ATTAGGTTGGTTTGTTAAAAAATTAAATAAAGATATAAGTTTTATCTATAGTAGCTACCA 730 | |||||||||| |||| ||| | || | ||| || | ||| || || | | | || Sbjct 111301 ACTAGGTTGGTTCCTTAAGAAACTGAACAGAGAGTTAGGAAGTATATACAGCAACCATCA 111360 Query 731 ATGTGAGAAACAGAATATTA-AAG--ATGCCGAAAGTAAAGCAAGTAACCTAGATGTGTG 787 ||| || | || | |||| ||| ||| || || ||| || |||||| |||||| Sbjct 111361 CTGTAAGCAGCAAGACATTACAAGCAATGAGGACAG---AGCCAGCAACCTAAGTGTGTG 111417 Query 788 GATGAAAGACGGCGTTGTTAAACCTTACAAATACTTTAACAAGCAAACCAAACAAGAATA 847 | | ||||| || || || || || ||||| |||||||| | |||||| |||| || Sbjct 111418 GGTAAAAGATGGAGTAGTGAAGCCATACAAGTACTTTAATAGAACTACCAAAGAAGAGTA 111477 Query 848 TAACAAACCAATTAATATACTAGAATATACAGTAATATACTTGTTTAGTAAAGATAAAAT 907 ||||||||||| || || || |||||| |||||| | | | |||||||| || Sbjct 111478 CAACAAACCAATCAACCTAAGGGAGTATACATGCATATACCTACTGAACAAAGATAAGAT 111537 Query 908 AAATGAAGAAACTATGAGTGGTTACTATGCTAGTGGCAATGGTGGAATTATTGACATGCT 967 | ||| | | ||||||||||| |||| ||| |||||||| ||||| |||| || Sbjct 111538 TACAAGAGAGAACAAGAGTGGTTACTTTGCTGCTGGGAATGGTGGGATTATAGACAACCT 111597 Query 968 GACTGATAAAGAAAGAAAAACTTTAAGAAAAATGTACTTAGATGAACAAACTTCAGATAT 1027 || |||||||| || | || ||| | ||||| ||||| ||| || || | Sbjct 111598 AACCACCAAAGAAAGGTTTGCTCTGAGGAAACTTTACTTGGATGAGAAAAGCTCTGAACT 111657 Query 1028 ATTACAAGA---TGGCGATGACTGGG------ATGTCAGCCAACAGGCGCCAA------A 1072 || |||| || || || |||| | ||| | ||| | | Sbjct 111658 GCTAGAAGACCCTGAGGAGGATTGGGGAACAGAAAGCAGTGTAGAGGTTACTTTGGTGGA 111717 Query 1073 AGCAACCGACCAAATTGACTCAGCAACCTCAAG----AACAGGAACTAA--CTTAATTTG 1126 ||| | | || ||| || || | || || ||||| || ||| | || Sbjct 111718 TGCAGCTGTTGCTGTT-ACTGAGAAAACAGAAATGAAAAAAGGAAGCAAGACTT--TGTG 111774 Query 1127 GAAATCATGTGCTACTACAGTAACCTCAAAAAGGAATGTTGCTGAACCAACTAAGCAACC 1186 | | |||||| | | || ||||||| |||||| | |||||| | |||||||| Sbjct 111775 GGACTCATGTTCCAGTAAAGTAACCACAAAAAAG---------GAACCAGCAAAGCAACC 111825 Query 1187 ATCTaaaaaaaTGTGCTCAGCTCAAAGTACTTTAGAAGAACTATATAACTTTGGTTGCTT 1246 |||||||| || || |||| | || | |||| | || | || ||| |||||||| Sbjct 111826 TTCTAAAAAGATAAGCACAGCCAAGAGCAACCTAGAGAAGCTGTTTAGCTTAGGTTGCTT 111885 Query 1247 TACTCAAGAAGACATGATTTTAAAGATGAGTGATAGGTACCTTGAAATATCTTTAGAATC 1306 ||||| ||| |||||||| ||||| ||| |||| || ||||| | || | ||| | Sbjct 111886 TACTCCAGAGGACATGATCTTAAAAATGGGTGAGGACTATCTTGAGCTGTCCCTGGAAAC 111945 Query 1307 AAACGGGCCTCAAAAAATTAGCACTTTGCTTCACATGAACCAAGTAAGGACATCAAGCAT 1366 ||| || | || || || || || |||||||||||||||||||||| |||| || ||| Sbjct 111946 AAATGGACTGCAGAAGATAAGTACCTTGCTTCACATGAACCAAGTAAAGACAGCATCCAT 112005 Query 1367 ACTTACTGCCTTTGATTGTATTAAAAAATTTAATGAAGATGAAAATGACCAACCT---TT 1423 || ||||||||||| || || | | || || ||||||| |||| ||| || Sbjct 112006 GCTGACTGCCTTTGAATGCATCATGCAGTTCAACCAAGATGAGGATGAGGGACCACTGTT 112065 Query 1424 ACTAGCAACCTTAAAAGAGATGGGACTTAATGAAAAAGTACTTAAACAAGTATTAGGTAC 1483 || || | || |||| ||||| |||||||| | ||| || | || ||||| || Sbjct 112066 ACAAGTGA---TACAAGACATGGGCCTTAATGAGCAGACACTGAAGAAGGTCTTAGGAAC 112122 Query 1484 CGTTTTATCTAAGCAAAGTGGCAAAAGAGGTTGCATTTGGTTTTATGGACCAGGAGGTAC 1543 | | || | |||||| |||| |||||||||||||||||||| ||||||||||||||||| Sbjct 112123 CATACTAACCAAGCAAGGTGGAAAAAGAGGTTGCATTTGGTTCTATGGACCAGGAGGTAC 112182 Query 1544 TGGAAAGACCTTGCTAG-CAGCACTACTATGCAAAGCAACATTAAACTATGGTATGGTTA 1602 |||||| || |||| | |||| || ||||| | ||| | | |||| ||||||||||| Sbjct 112183 TGGAAAAACACTGCTGGCCAGC-CTGATATGCCAGGCAGTAGTTAACTTTGGTATGGTTA 112241 Query 1603 CTACAAGCAATCCGAACTTCCCATGGACTGACTGTGGTAATAGAAACCTTATTTGGCTTG 1662 |||| |||||||| ||||| ||||||||||||||||| || |||||| | ||| || Sbjct 112242 CTACCAGCAATCCAAACTTTCCATGGACTGACTGTGGAAACAGAAACATCTGCTGGGCTG 112301 Query 1663 AAGAATGTGGTAACTTAGGTAACTGGGTTGAAGACTTTAAAGCCATTACTGGAGGTGGTG 1722 |||| ||||||||||||||||||| || || |||||||| ||||| |||||||| || Sbjct 112302 AAGAGTGTGGTAACTTAGGTAACTTTGTGGAGGACTTTAAGGCCATCACTGGAGGAGGCA 112361 Query 1723 ATGTAAAAGTGGATACCAAAAACAAGCAACCTCAATGTATTAGAGGAAATGTAATTGTGA 1782 ||||||| ||||| ||||| |||||||||||||||| || | |||| | || || | Sbjct 112362 ATGTAAAGGTGGACACCAAGAACAAGCAACCTCAATCCATAAAGGGAACCATGATAGTCA 112421 Query 1783 CAAGTAACACCAACATTACAAAAGTAACTATTGGATGTGTAGAATCCAGCGCTCATGTTG 1842 |||| ||||||||||| ||||| || ||| | ||||||||||| | || |||||||| | Sbjct 112422 CAAGCAACACCAACATCACAAAGGTGACTGTGGGATGTGTAGAGACAAGTGCTCATGTAG 112481 Query 1843 AACCACTTAAGCAAAGAATGGTAAAGGTACGTTGCATGAATCAAATCAACCCTAAAAGCA 1902 | ||||| || || || ||||| || || | |||||||| | ||||||||| ||||| Sbjct 112482 AGCCACTGAAACAGAGGATGGTTAAAGTGAGATGCATGAACCGCATCAACCCTGGAAGCA 112541 Query 1903 AAATAACACCAGGAATGTTAAGAAAATGGCT-AGCTTCCTGGGATGGAATACCAATCAAA 1961 || |||||||||| ||| | ||||||||||| ||| | ||||| | |||||| Sbjct 112542 AACTAACACCAGGGATGCTCAGAAAATGGCTGAGC-ACATGGGACAAGAAACCAATAGTC 112600 Query 1962 CTAAACCATGAAATGCCTGACCTTTACTTAGGTAAGT 1998 ||| ||||||| ||| ||| || || | ||| ||| Sbjct 112601 CTAGACCATGAGATGAATGAACTCTATGTTGGTGAGT 112637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15647594769135