Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq203135 84.2 6e-13 >seq203135 Length=1754 Score = 84.2 bits (92), Expect = 6e-13 Identities = 150/217 (69%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 2995 CTTTGGATACAGCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCACAGCCACTGGAG 3054 |||||| ||| |||||||| || | ||||||| |||| ||| || || |||| Sbjct 1021 CTTTGGGTACCACACCCCCTAGGCCAATGTTGACTTCAACCATTTC-ACTGCTCTGGGAG 963 Query 3055 CCCCCGAGACTGGCAAAGACTCATCAACAACTACTGGGGCTTCAGACCCCGGTCCCTCAG 3114 | || ||||| | | ||||||| ||||||||||| |||||| ||| |||| Sbjct 962 CTCCAGAGACCAATAGTGGCTCATCAGTAACTACTGGGGATTCAGAGCCCAAAATCTCAA 903 Query 3115 AGTCAAAATCTTCAACATTCAAGTCAAAGAGGTCACGGTGCAGGACTCCACCA---CNNN 3171 |||| | ||||||||||| ||||| || |||||| | | | || || || | Sbjct 902 AGTC-AGATCTTCAACATCCAAGTTAAGGAGGTCTCAGCCAAAAACAGCATCATGGCGGG 844 Query 3172 NATCGCCAACAACCTCACCTCCACCGTCCAAGTGTTT 3208 ||| ||||||| |||| ||||||| || || ||| Sbjct 843 CATCACCAACAAACTCATAGCCACCGTTCAGGTATTT 807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14685890077300