Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ellobius_20talpinus_20[genbank_20GCA_5F001685095.1_202016-07-14] 350,460 sequences; 2,265,966,243 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq107152 77.0 1e-10 >seq107152 Length=6463 Score = 77.0 bits (84), Expect = 1e-10 Identities = 128/184 (70%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 1245 ACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCTA 1304 |||||| | ||| |||||||||||| || | ||||||||||| || || ||| Sbjct 5133 ACCTGCCAATACCCACAAGACCAACATTGCCAAAGCTATTGCCCACATTG-ACCCCTCTG 5191 Query 1305 TGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATGAT 1364 | | || |||||| ||| | || | ||||| || || || || || ||||||| Sbjct 5192 TAGCCATGTCAACTGGGCCATCAAGGATTTTCCCTTAAATAGTTGAGTGGACAAGATGAC 5251 Query 1365 TATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATTCT 1424 ||| || ||||| || ||||| || || |||||||||| | | ||||| || || Sbjct 5252 TATTTGACAAGAAGAAGGAAAAATTACATCCCAGGTGGTGGAGTTGTCCAAAGCCATCCT 5311 Query 1425 GGGA 1428 |||| Sbjct 5312 GGGA 5315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14813399433300