Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq71756 98.7 3e-17 >seq71756 Length=1205245 Score = 98.7 bits (108), Expect = 3e-17 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 1551 ACCACCGGGAAGACCAACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGT 1610 ||||| | ||||||| ||| |||| || |||| |||||| | |||| || ||||| Sbjct 231783 ACCACAGTAAAGACCAGCATGACAGAGGCCATTGTCCATGCCATGCCCTCCTTTGGCTAC 231842 Query 1611 GTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGG 1670 |||||||| | |||||||||||||| || | ||| || | | || || | || ||| Sbjct 231843 CTTAACTGGGCCAATGAGAACTTTCCCTTCAGTGACTGAATCGGCAAGGTGATTATCTGG 231902 Query 1671 TGGGAGGAGGGAAAAATGACTAATAAGGTTGTTGAATCTGCAAAAGC 1717 ||||||||||| || |||||| ||| | || ||| || | || || Sbjct 231903 TGGGAGGAGGGGAAGATGACTTTCAAGATGGTGGAAACTACCAAGGC 231949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16213936545950