Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq71756 107 6e-20 >seq71756 Length=1205245 Score = 107 bits (118), Expect = 6e-20 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 1553 GGACCTGCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCCATGCTGTACCCTTC 1612 || || | |||||| | |||||||| ||| | ||||| |||| |||||| | |||| | Sbjct 231774 GGCCCCGTGACCACAGTAAAGACCAGCATGACAGAGGCCATTGTCCATGCCATGCCCTCC 231833 Query 1613 TATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACTGCGTTGATAAAATG 1672 | ||||| |||||||| | ||||||||||| || || | |||||| | | || || Sbjct 231834 TTTGGCTACCTTAACTGGGCCAATGAGAACTTTCCCTTCAGTGACTGAATCGGCAAGGTG 231893 Query 1673 CTTATATGGTGGGAGGAGGGAAAAATGAC 1701 |||| |||||||||||||| || ||||| Sbjct 231894 ATTATCTGGTGGGAGGAGGGGAAGATGAC 231922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16297068541650