Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq71756 138 3e-29 >seq71756 Length=1205245 Score = 138 bits (152), Expect = 3e-29 Identities = 133/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 1239 GTTCGGACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCC 1298 ||| || || | |||||| | ||||||| ||| | ||||| |||| |||||| |||| Sbjct 231770 GTTTGGCCCCGTGACCACAGTAAAGACCAGCATGACAGAGGCCATTGTCCATGCCATGCC 231829 Query 1299 GTTCTATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAA 1358 | || ||| | | |||||||| |||| ||||||||||| |||| ||||| ||| || Sbjct 231830 CTCCTTTGGCTACCTTAACTGGGCCAATGAGAACTTTCCCTTCAGTGACTGAATCGGCAA 231889 Query 1359 GATGATTATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAAC 1409 | |||||||||||||||| ||||| || ||||| |||| |||||||||| Sbjct 231890 GGTGATTATCTGGTGGGAGGAGGGGAAGATGACTTTCAAGATGGTGGAAAC 231940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14858245539150