Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fukomys_20damarensis_20[refseq_20GCF_5F000743615.1_202014-09-04] 74,730 sequences; 2,333,892,479 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq71756 127 6e-26 >seq71756 Length=1205245 Score = 127 bits (140), Expect = 6e-26 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 1211 GAGGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAACGAGAACTTC 1270 |||||||| ||| | |||||| || |||| | | |||||| |||| |||||||| Sbjct 231807 GAGGCCATTGTCCATGCCATGCCCTCCTTTGGCTACCTTAACTGGGCCAATGAGAACTTT 231866 Query 1271 CCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAGATGACGTCC 1330 ||||||| ||||| | | |||| |||| ||||||||||||||||| |||||||| | | Sbjct 231867 CCCTTCAGTGACTGAATCGGCAAGGTGATTATCTGGTGGGAGGAGGGGAAGATGACTTTC 231926 Query 1331 AAGGTCGTCGAGAGCGCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGTCGACCAGAAG 1390 ||| | || || | |||||||| ||||| ||||||||| | || || | ||||| Sbjct 231927 AAGATGGTGGAAACTACCAAGGCCGCTCTCGGGGGCAGCAAGATCCGTGTGGGTCAGAAA 231986 Query 1391 TGCAA 1395 |||| Sbjct 231987 GGCAA 231991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13592081296950