Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meriones_20unguiculatus_20[refseq_20GCF_5F002204375.1_202017-06-21] 68,793 sequences; 2,523,124,066 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq2096 93.3 1e-15 >seq2096 Length=284554 Score = 93.3 bits (102), Expect = 1e-15 Identities = 125/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 1340 GCCACCACGGGCAAGACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGC 1399 |||||||| ||||| ||||||| || | || || ||| | || | |||||||| | | Sbjct 256231 GCCACCACCAGCAAGGCCAACATTGCCAAGGCTATTGCCTATGCTGA-CCCTTCTATGAC 256289 Query 1400 TGCGTCAACTGGACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATC 1459 ||||| ||||||| ||| |||||||||||| || || ||||||||| ||| Sbjct 256290 CATGTCAAGTGGACCAGCGAGGACTTTCCCTTCACCATCTGAGTGGACAAGATGACTATC 256349 Query 1460 TGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCAT 1512 ||| ||| || | ||||| | ||||||| || |||| | ||||| |||| Sbjct 256350 TGGCAGGAAGAAGAAAAGATTGCATCCAAGGTGGTAGAGTACTCCAAGACCAT 256402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14974324483335